Carica papaya (papaya): 110822814
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Entry
110822814 CDS
T05151
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03440
Homologous recombination
cpap03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110822814
03460 Fanconi anemia pathway
110822814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpap04121
]
110822814
03036 Chromosome and associated proteins [BR:
cpap03036
]
110822814
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110822814
Ubiquitin system [BR:
cpap04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110822814
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110822814
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
110822814
FA (Fanconi anemia) pathway
Downstream FA components
110822814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Anticodon_2
Motif
Other DBs
NCBI-GeneID:
110822814
NCBI-ProteinID:
XP_021908724
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MSTWQIFSDAGDNNFRWEISSGRVIPSKSDDRFINSGPPLPSMADLLLQAGSSKLLEIGE
REAEKLPLFRTALGKSVVLKESSIAKALSVLDDDGATSSGDMLRRDNGLVSLNSFFQTGS
GKSVNISSAGLVRAKKLLGLEEDNAHCNLQGECVRDLSDCTEQKGRDNLDTKEGTNNYGV
IDSSSFQMHSSSFKACLAGSDLNSEVNSTGMHYDILNSTPKMPPMKFHTAGGRSLSVSGD
ALKRARSLLGDPELGNFLDKMDADDSLRKSGGIQLNKEQDKYTPCSHQGTEKNVCVSRVF
ISPLQSFNKQLRSPFNSENLALGSNLIEKFEAVSDENICALSSSKSSRDEPLDVRSSALQ
SIINYSSKKGAGSRINPLGQSSCMPLTDISNHVGKVNINNKPTATEKRRLGSASSMSPFK
RPRSSKFSTPLNKTSKTVSNGLSSLSSERSCSRRVVSTRYPFQVPRVYIKEYFVLPPLAQ
SKLEHSLHQVRSDNADKYEFTDDSGNSIGAEGFFHMLVHSGASTQHVSKEWVRNHYKWIV
WKLACYDRCYPSKSTGKFLTLSNVLEELKYRYEREVNHGHRSAIKRILDGDASTSSMLVL
CISAVHLSCEQKIGNHSMETNGPDDKNLAQVELTDGWYSIGALLDILLSKQLHSGKLFVG
QKLRICGAGLSGWVGPISPLEASKSVSLLLNMNGTYRACWADRLGFCKSVGDPLAFRCIK
RNGGPVPCTLVGVTRVYPILYKERLTNGKSIVRSEKTEMKMMQLFNQRRSVIAEGILSEY
QRGPNSYPIHNDSDSEGAKILKILETAAEPEVLMAEMSPEQLTSFATYKAKLEASRQREI
EKTIEKALEDTGLREREVTPFVRVRVTGLTTGNHQGKSITKKEGMITIWNPTEKQQSELV
EGRVYVFKGLIPMNSDSETLYLQARGSTTQWEPVPPEAVQHFEPFFNPRKSVSLSKLGEV
PLSSEFDIAAWVLYVGEVYIDAQRRKQWVFVTDGSVSDIKSGEISNSLLAINFCSPCVDD
DSFLQINHNLAGSLVGFCDLVKKAKDQKNELWVAEATENSSYFLSFDFPRCSHLKSAAAS
VQRISSLSIQKLKEKVLFIIGECKD
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctggcaaatcttctccgacgccggcgataataatttccggtgggagatatca
tctggtcgagtaatcccatccaaatccgatgaccgcttcatcaactctggcccgccgctc
ccttccatggctgacctcttgcttcaagcaggaagctcaaagcttctagagataggtgaa
cgggaagctgagaaactgccgttgttcaggaccgcactaggtaagtcggtggtgttgaaa
gagtcatcaatcgctaaagcgttgtctgttctcgatgacgatggcgctacttcctcgggt
gatatgcttagaagagataatggccttgtttctttgaattcttttttccaaacgggttct
ggaaaatcagttaatatttcttcggccggtcttgttagagccaagaaactgttgggattg
gaagaagataatgctcattgcaacttgcaaggggagtgtgtgagagatctgtctgattgc
actgagcagaaaggacgggacaatttagatacaaaagagggaacaaataattatggggtt
atagattcttcatcatttcaaatgcattcctcaagtttcaaggcatgtttagctggaagt
gatttgaacagtgaggttaattcaactgggatgcattatgacattcttaattcgactccc
aagatgcccccaatgaagtttcatacagccggtggaagatcattatctgtttctggtgat
gcattgaaacgagcaaggagtctccttggtgatccagagttggggaatttcttggacaag
atggatgcagatgattccttgaggaaatctggtggtattcagttgaacaaggaacaagat
aaatacactccttgttctcatcaaggaactgagaagaatgtatgcgtgtcaagggttttc
atatcccctttgcaatcatttaacaagcagttgagatcaccattcaattcagaaaattta
gctctgggaagtaacttgatcgagaaatttgaggcagtcagtgatgaaaatatttgtgct
ttgagtagtagcaaatcttcgagggatgagcccttagatgttcggtcttctgcactgcag
tcaataataaattattcttcaaaaaaaggtgctggttcaaggattaatcctcttggacag
tcttcttgcatgcccctcactgacatatcaaatcatgttggtaaagttaacataaacaat
aaaccaactgctactgaaaaaaggaggcttggaagtgcaagttctatgtccccattcaag
agacctcgcagttcaaaattctcaactccattgaataaaacaagtaaaactgtttccaat
ggtttgtcttctttgtcatcagaacgttcctgctccagaagggtggtctctactaggtac
ccatttcaggttccaagagtatacatcaaggaatattttgtattgccgccattggcccag
agcaagctagagcattcactgcaccaagtaagatcagataatgcagataaatacgagttt
actgatgattctggtaacagcattggggcggaaggtttcttccatatgttggtgcactca
ggagcttcaactcaacatgtgtctaaagagtgggtcagaaatcactacaagtggatagtt
tggaaacttgcatgttatgatagatgctatccatccaaatcaactgggaaatttttgact
ctatccaatgtgcttgaggaactaaagtacagatatgagagagaagtaaatcatggtcac
cgttctgcaattaagaggattcttgacggggatgcatcaacttcttcaatgttggtgctc
tgcatttcagccgttcacctaagttgcgaacaaaagattggtaatcattccatggaaaca
aatgggcctgatgacaagaaccttgctcaagtagaactaactgatgggtggtattcaata
ggtgctcttctggacatattgttgtcaaagcagcttcattctggaaaattgtttgtgggg
cagaagcttaggatatgtggagcaggattatctggttgggttgggccaatttcacccctc
gaggcatcaaaatctgtcagtttactgttgaatatgaatgggacatacagagcttgctgg
gccgatcgacttggtttctgcaaaagtgtcggtgatcctttggcttttaggtgcatcaag
agaaatgggggcccagttccttgtactttagttggagttacacgggtctatcctatactg
tacaaggagaggttaactaatggcaaatctatagtcagatcagagaagacggagatgaaa
atgatgcaactattcaaccaaaggcgctcagttattgccgagggtatcttatctgaatat
cagagggggcccaacagttacccaatccataatgacagtgatagtgaaggtgcgaagatt
ttaaaaattcttgaaacggctgctgaaccagaagttttaatggcagaaatgagcccagag
caactgacatcatttgctacatataaagccaaattagaggcatctaggcaaagagagata
gaaaaaacaatcgagaaagctctggaagacactggcttaagagagagagaagtcactccg
tttgtgagagtaagagttacggggttaactacaggaaatcatcaaggaaagagcattaca
aaaaaggaaggcatgataacaatttggaatccaacggagaagcagcaaagcgaactggtc
gaaggacgggtatatgttttcaaagggcttataccaatgaactcagattcagaaactctt
tatttacaagcaagaggatctaccacacagtgggagcctgtgcctcctgaagcagttcaa
cacttcgagccatttttcaatccacgcaaatctgtttcattatcaaagttgggtgaagtt
cctctttcaagtgaatttgatattgctgcatgggttctgtatgtgggagaggtttatatt
gatgctcagcgaaggaaacagtgggtgttcgtgacagatggttctgtttcagatataaaa
tcaggagaaatatcaaattctttacttgctatcaacttctgctcaccatgtgttgatgac
gattcctttttgcaaatcaatcacaatcttgctggatccttggttggattctgtgatctt
gtcaagaaagccaaggatcagaaaaatgaactctgggttgctgaagcaacagaaaattca
tcttattttttgagttttgattttccacgttgttctcacctcaaaagtgctgctgcttct
gtccagagaatctctagcttgtctattcagaagctcaaggagaaggttttatttataatc
ggtgaatgtaaggactag
DBGET
integrated database retrieval system
