Carica papaya (papaya): 110823190
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Entry
110823190 CDS
T05151
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110823190
Transcription machinery [BR:
cpap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110823190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
110823190
NCBI-ProteinID:
XP_021909213
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MGVVTVSSSAARSPLGLIKKLSSNHSGSRSRPSIVAFKADKSNSTALILPQEQILLPVEA
PKKQQKRLRKSSKVLKNVKAVSTDEASPCILDVDYNEAAAKLESIYKLSPSTKTSDVGDV
DSMPRRERRRRRRISGDDDKADNEIGSFVVRNPAKRAKRLSLDKRIALGRDKNERKVAAF
WKKSDRKNENEKIEELVREYSASTDLVSLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLQ
VKEELEKNLGHEPTEGELAKATNMNIVQVKKQMEIGRAARNKLIKHNLRLVLFVINRYFQ
DFANGSRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYSLFWIRHAIIRSMTVSSFTRVSF
GLESVRVEIQKAKLELLFELGRLPTDDEIIKKVGISPERYHEVMRASKPVFSLHSRHAVT
QEEFINGITDVDGVGSDSQRQSALLRLALDDVLDSLKPKESLVIRQRYGLDGRGDRTLGE
IAGNLNISREMVRKHEVKAFMKLKHPTRVDYLCRYIV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtctcgagctcagcagcccggtctccattgggattgatcaaaaaa
ctttcgagtaatcattctggatcaagatcaagaccatcaattgttgcattcaaagcagat
aaatcgaatagcacagctttgattttgccccaagaacaaatcttgttgcctgtagaagca
cctaagaagcagcaaaagagactcagaaagtctagcaaagttttgaaaaatgtaaaagca
gtgtccaccgatgaggcttctccatgtatcttggatgttgactacaacgaggctgcagct
aaacttgagagtatatacaagcttagcccttctactaaaacttctgatgtgggagacgta
gatagtatgccaaggagagagcggaggaggaggaggaggattagtggagatgatgataaa
gcagataatgaaattggtagttttgtggttaggaacccggctaagagggctaaaagattg
agtcttgataagaggattgctctgggaagggacaagaatgagagaaaggtggctgcattt
tggaagaaaagtgatcggaagaatgagaatgagaagatagaggagcttgtgagggagtat
tcggcttcgactgatttggtgagcttggactggaagaaaatgaagatacctccagtttta
tcttccactgaacatgcttggttgttcaagttgatgcagcctatgaaggcactccttcaa
gtgaaagaggaattggagaagaatctcggacatgagccaactgaaggtgaattagccaag
gcaacgaatatgaatattgttcaagttaaaaaacagatggagattggtagagctgcaaga
aacaagctcattaagcacaatctccggctcgtgttgttcgtaatcaatagatactttcaa
gactttgcaaatggatcaagattccaagacctctgtcaggctggagttaaaggtcttatt
acggcaattgatcgttttgaaccaaagaggagattccggctttccacctacagtttgttt
tggattaggcatgccattatacgttccatgactgtctcgagctttacccgcgtctcgttt
ggacttgaatcggttagagtagaaattcagaaagccaaactcgagttgttgtttgagctt
ggaagattaccaaccgatgatgagatcataaaaaaagttggaatttccccggaaaggtac
cacgaagtaatgagagcttcgaaaccagttttttctctccattcgaggcatgctgtcaca
caagaagagttcattaatgggattacagatgttgatggtgtcggaagtgatagtcagagg
caatctgctcttcttaggctggctctggacgacgtgcttgattctctgaagcctaaagag
agcttggtaataagacaaagatatggtcttgacggaagaggtgaccggacgttgggagaa
atcgcgggaaacctaaatatttcaagagagatggtaaggaagcatgaagttaaggctttc
atgaagctcaagcatccaactcgagtggattatctttgccgatatattgtctga
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