KEGG   Carica papaya (papaya): 110823422
Entry
110823422         CDS       T05151                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110823422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110823422
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110823422
Spliceosome [BR:cpap03041]
 Complex B
  Other components
   Prp19 complex
    110823422
 Complex C
   Prp19-CDC5 complex
    110823422
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110823422
SSDB
Motif
Pfam: BCAS2 FUSC CODH_A_N TLN1-like_RS MATCAP HMMR_N DUF7801 DUF1664 Plk4_PB2 Na_K-ATPase
Other DBs
NCBI-GeneID: 110823422
NCBI-ProteinID: XP_021909489
LinkDB
Position
Unknown
AA seq 251 aa
MAAKNGDILMLEAPPDASRPWASASNAEMVDALPYIDEDYGNPQVKAEVDRLVEEEMRRS
SKKPADFLKDLPPVPKFNFENCPMLAREYERIRSGKPPVMIDFNARYEFDVPIANKRNDD
TAWKQSLQRNQRSLRQKMIELENLDLMAKYGPELWRQNNQRLEAFLSRMRKLAQEYHEKI
ETVNRERKYHQQNTAYELNALSAQWNELCQKNIEIQAVCSKLESHIDELKREASERSWNL
EANLDNGSLAH
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcagcgaagaacggagacattctcatgctggaggcaccgccggatgcgtcgaggcca
tgggccagcgcatccaatgcggagatggtggacgcattgccgtacatagacgaggactac
ggaaacccgcaggtgaaagcagaggtcgatcgcttagtagaggaagagatgcgcagaagc
tccaagaagcctgctgattttctcaaagatttgcctccagtccccaagttcaatttcgag
aactgccccatgcttgccagagagtatgagcgaataagatctgggaagcctcctgtgatg
attgacttcaatgcacgatatgaatttgacgtgccaattgcaaataagagaaacgatgat
actgcttggaagcagtcacttcaaagaaatcaacggtctttgcgacaaaaaatgatcgag
ttggaaaatttggacttaatggcaaaatatggccctgaactctggagacaaaacaaccaa
cgattggaagcattcttatccagaatgagaaaattggctcaggagtatcatgaaaagatt
gaaactgtaaatcgtgaaagaaaataccatcagcaaaatactgcatatgagctcaatgct
ttgtctgcacagtggaacgagctgtgtcaaaagaatattgaaattcaagctgtttgttct
aaactagaaagccatatagacgaattgaaaagagaagcttcagaaaggagctggaacttg
gaagctaatttagacaatggctctttggcacattaa

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