Carica papaya (papaya): 110823462
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Entry
110823462 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110823462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110823462
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110823462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110823462
NCBI-ProteinID:
XP_021909540
LinkDB
All DBs
Position
Unknown
AA seq
302 aa
AA seq
DB search
MGQPDTSGDLSSEMEVDAFRRLFPLRFFESHLSESVRRDXRPLGKARETTIALGLVASAN
GSALAKIGSTTMLAAIKMEVMAPSTESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPIIS
KQLSDTISSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIP
IVSLNDNGKVVVVSNENGGMFEKEPVNREKRKLSLRSIPFSLTCILHKNYILADPTAEEE
SIMETLVTIVLDQSSQLISLYKPGGPVLGFTSTIQDCIGLTKQRVKELTEILDEAISGME
VD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggggcagccagacacttctggggacttgtcatcagagatggaagtggatgctttcagg
cgcctcttccctcttcgcttctttgagagtcatctatcggaatctgtacgtcgtgatngc
aggccacttggaaaagctagagagaccaccatagctcttgggcttgttgcatctgctaat
ggctcagcactcgcaaagattggttccactactatgttggctgctatcaaaatggaagtc
atggccccttccacagagtccccagatgagggctgcatagctgttgatttccacatgcct
ccaatttgttctccgattgttaggcctggccggccagctgaggcagcacctattatatca
aagcagctatctgacacaatctcaagttctggcatgatcaatctgaaggaattgtcctta
gttagtggaaaagctgcttggatggcatatttggacatatactgtctggatgcagatggt
gctctttttgatgctgcattactttctgctgttgctgccttctcccatttgcaaattcca
attgtttccctgaatgacaatggaaaggttgttgtggtttccaatgaaaatggaggaatg
tttgaaaaggaaccagttaatagggagaagagaaagctctccctgcgcagcatccctttc
tcattaacatgcatacttcacaagaattacattctggcagaccctacagcagaggaagag
tcaatcatggaaacccttgtaactattgttttggatcaatccagtcaactcatttctctt
tacaagccaggtggaccagttcttgggtttacatctactattcaggattgcattggatta
acgaagcaaagagtgaaggaacttaccgagattttagatgaagcaatttctggtatggaa
gttgattga
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