Carica papaya (papaya): 110823887
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Entry
110823887 CDS
T05151
Name
(RefSeq) uncharacterized protein LOC110823887
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110823887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpap03400
]
110823887
DNA repair and recombination proteins [BR:
cpap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110823887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
110823887
NCBI-ProteinID:
XP_021910076
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MMRKRKDRAEILKTLNFEENGEKEDEEQKGKRFFACYLLTSINPRHKGQTYIGFTVNPRR
RIRQHNGEIRSGAWRTKSKRPWEMVLCIYGFPTNVSALQFEWAWQHPAESVAVRQEAASF
KSFSGVANKIKLAYTMLCLPAWNSLNITANYFSTKYTHHGAVCPSLPKHMKVQVCSVDEL
PCYSKGGENMFEDEKDLDDGGEHDEDSNFGEAATGINADGNTGEAAPETFADVAVSGSTD
HSHSSSYQHLGWSEEREDSAIGLDNTRSFSLLDSPVRTYSKATSFCAEEIAEDVNMTGLV
KESSIVFGKQKGEQELRSIPNGDEGQQPCSNEKQSNSSVCIDVEVIDLLTPSPCCRTGSN
RKKRKAASTFPPEIIDLTWSPSYVQL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaagagaaaggatcgagcagaaatccttaaaaccctaaatttcgaagaaaat
ggagaaaaggaagacgaagaacaaaagggaaagaggttcttcgcttgctacttgttaaca
tctatcaacccacgccataagggccaaacctacatcgggtttacagtgaacccacggcgt
cggattaggcagcacaatggagagatcaggagtggtgcgtggaggacaaagagcaagcgt
ccttgggaaatggttctgtgcatttatggtttcccaactaatgtttctgcccttcagttt
gagtgggcgtggcagcatccagcagaatcagtagcggtaaggcaggaagctgcaagtttt
aaatccttttctggagttgctaataagataaaacttgcatatacaatgctctgccttcca
gcctggaatagcttgaacatcactgcgaactatttctcaacaaaatacacacatcatggt
gctgtttgtccaagcttaccaaaacacatgaaggtccaagtttgttccgtggatgaactt
ccctgctattccaaaggaggtgagaatatgttcgaggatgagaaagacttggatgatgga
ggagaacatgatgaagatagtaacttcggcgaagctgcaactggaataaatgcagatggt
aacactggtgaagctgctccagagacatttgcagacgtggcagttagtggttcaactgat
cattcacatagctcttcgtatcagcatttaggatggtctgaagaacgtgaagattccgca
ataggtttggataatacacgatcctttagtttgcttgattcaccggttaggacatattca
aaagccacaagcttttgtgctgaagaaattgcagaagatgtaaatatgactggcttggtt
aaagaaagcagtattgttttcggaaagcaaaagggggaacaagaattgaggagcatacca
aatggtgatgaaggtcaacagccatgttcaaatgaaaaacagtccaactcctctgtgtgt
attgatgttgaggtcatagacttgttgaccccatctccttgttgcagaactggatccaac
agaaagaagaggaaagctgcttctactttccctcctgagattattgacttgacttggtct
cccagttatgtccagttatag
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