KEGG   Carica papaya (papaya): 110824008
Entry
110824008         CDS       T05151                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03018  RNA degradation
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110824008
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110824008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110824008
   03041 Spliceosome [BR:cpap03041]
    110824008
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110824008
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110824008
Spliceosome [BR:cpap03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110824008
SSDB
Motif
Pfam: LSM Hfq DUF150_C
Other DBs
NCBI-GeneID: 110824008
NCBI-ProteinID: XP_021910242
LinkDB
Position
Unknown
AA seq 80 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRVNVLMQLG
RGSFSFDPFLDMDHQCQRDV
NT seq 243 nt   +upstreamnt  +downstreamnt
atgtctggaaggaaagagacggtgctggatttggcaaagtttgtggataaaggagttcaa
gtcaagcttactggtggcagacaagtgacaggaactctaaagggctatgatcaattgtta
aatcttgtcctggatgaagcggtggagtttcttagagtgaacgtactgatgcagcttggt
cgtggtagtttctcttttgatccttttttggatatggatcatcaatgccaacgagacgta
taa

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