Carica papaya (papaya): 110824055
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Entry
110824055 CDS
T05151
Name
(RefSeq) protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110824055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110824055
Spliceosome [BR:
cpap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110824055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
110824055
NCBI-ProteinID:
XP_021910265
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MDKEKSNKRTREDRDREHKHHRSRDRDEKYHDSDHHHHHHHHRSEHKSSKREDRESSHDY
ETKTEKSYDHRDDREESRDRGYVRESKRERSHEPRNEREGSRDRVRDKESRRERSHEPRN
EREGSRDRELKREEREGSRYRAKSREVKREDSYEERERENENVSRNKRKDREENEGRDGE
KKAKVSEERRERRRFEDKVKEEVDAGVVEDVKKEVKVKEEVNYHDGDVNSGGSVRNGAAQ
NSATMASRTVPENSLVPGHPLPTKVSSISTTNENRGVSITRSHEVPGKSSTDGSSSTAGK
SSGNLSLDALAKAKKALQMQKELSEKLKKIPLLNKGAGSTSDVSPHAGLKEGAKLVSSSS
GTVQGSVPSMTPTSAISAGSTSSSVLPSIAAASLKPPVNAPGLAGLSTIPNVEAVKRAQE
LAAKMGFRQDPEFAPLINLFPGQVPTEVVVPQKPTKAPVLRVDALGREIDEHGNVVNLTK
PSNLSTLKVNINKQKKEAFQILKPELDIDPESNPHFDARMGINKNKILRPKRMTFQFVEE
GKWSKEAEIIKLKSQFGEAGAKELKAKQAQLAKAKADINPNLIEVSERIITKEKPKDLIP
EIEWWDMPLLVTGSYGGVADGGITDDKLKMEKITIYVEHPRPIEPPAEPAPPPPQPLKLT
KKEQKKLRTQRRLAREKDKQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIR
TAAAEREQAHIDRNTARKLTPAERREKKERKLFDDSNTLETIVSVYKINDLSHPKARYKV
DVNARENRLTGCAVISEEVSVVVVEGGSKSIKRYGKLMLRRINWVESVKEEEEGGDGDED
KPVNKCLLVWQGSVAKQCFNRFYIHECMTEAAARKVFADAGVGHYWDLAVNFSED
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggataaagagaaatccaacaaacgcacccgagaggacagagaccgagaacacaagcat
caccgaagccgagaccgagacgagaagtaccatgactcggatcaccatcaccatcaccat
caccatcgatcggagcacaaatcatccaagcgcgaagatcgggaaagctctcacgattat
gaaaccaagaccgagaaatcgtacgatcacagagacgatagagaagagagcagggatagg
ggttacgtcagggaatcgaagagagagagatctcacgagccgcggaatgagcgagagggg
agcagagatagggttcgggataaggaatcaaggcgagagagatctcacgagccgaggaac
gagagagaagggagcagagacagggagctgaagcgagaggagagagaggggagcagatat
agagcgaagagtcgggaggtgaagcgcgaggactcttacgaggagagggagagagaaaac
gaaaatgtatcgaggaacaagagaaaagatagggaagagaatgaggggcgagatggggaa
aagaaggctaaggtttcggaggagaggagagagaggaggaggtttgaggataaggtgaag
gaagaggtggacgctggggttgttgaagatgtgaagaaggaagtcaaggtaaaggaagag
gtgaattaccatgacggggacgttaatagcggtggttcagttaggaatggtgctgctcaa
aactcggccactatggcatcaaggactgtgcctgaaaactctttggtccccggtcaccct
cttcctaccaaggtatcttcaatttctaccacaaatgaaaataggggagttagtattacc
agatctcatgaggttcctggaaaatctagtacagatgggtcatcttcaactgctggaaaa
agtagtgggaatctgtcgcttgatgctttagcaaaagctaagaaagctttgcagatgcag
aaggaattgtcagagaagctgaagaagataccattgctgaacaagggtgctggttcaaca
tcagatgttagcccacatgcaggattgaaggagggagcaaaattagtatcttctagttct
ggaacagtgcagggatcagtcccatcaatgactcccacttctgccatttctgctggctct
acatcaagttcagtcttaccttctattgctgcagcctctttaaagcctcctgtaaatgcc
cctggtcttgctggtcttagtactatccccaacgttgaagctgttaaacgtgcgcaggag
ctggctgctaagatgggatttcgccaggatcctgagtttgcccctctcatcaacttgttc
ccaggacaggtaccgacggaagttgtcgttccacagaagcctaccaaggcccctgttctt
cgtgttgatgcccttggtagggaaatagatgaacatggaaatgtagtgaatttgactaaa
ccaagcaatcttagcaccttgaaggtcaacatcaacaagcagaagaaagaggcatttcaa
attctaaaacctgagcttgatattgatccagagtcaaatcctcactttgatgcaaggatg
ggtatcaacaaaaataagattttgagaccgaaacggatgactttccagtttgtagaggaa
gggaaatggtcaaaagaggctgagataattaaactgaagagtcaatttggcgaagcagga
gcaaaggagctaaaagccaagcaagcacagctggcaaaggcaaaggctgatataaatcca
aatttgattgaggtgtcagagcggatcataaccaaggaaaagccaaaggatcttattcct
gaaatagagtggtgggacatgcctcttttggttactgggtcttatggtggcgtagctgat
ggtggcataactgatgataaactgaagatggagaagattaccatctatgttgaacatcct
cgtccaatcgaaccccctgctgagccggctccaccaccacctcaacctcttaagctaacc
aagaaagagcagaaaaaactgcgaacccagcggcgactagctagggaaaaagacaaacag
gaaatgatcagacaaggcctgattgaacccccgaaaccaaaggttaaaatgagtaactta
atgaaagttcttggctctgaagcaacacaagatcctactagacttgaaaaggaaattcgt
acagctgctgctgaacgtgagcaagcacacattgacaggaatactgcacgcaagctcact
cctgccgagcgccgtgaaaagaaagagagaaagctttttgatgattcaaatacacttgag
acaattgtgtcagtttacaagataaatgatctttcacatccaaaggcacgttataaagtc
gatgttaatgcaagagaaaaccgattgacaggatgtgcagtgatctctgaggaagttagt
gttgttgttgttgaaggcggaagcaaatctattaagaggtacgggaagcttatgcttagg
cgtatcaactgggtagaatctgtgaaagaggaagaggaaggtggtgatggagatgaggat
aaacctgtcaataaatgtttgttagtgtggcaaggtagtgttgcgaagcagtgttttaac
aggttttacatccacgaatgtatgaccgaagctgctgctaggaaagtttttgcggatgct
ggtgttggtcactactgggatctcgctgttaacttctcagaggattag
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