KEGG   Carica papaya (papaya): 110824966
Entry
110824966         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor U2af large subunit B-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110824966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110824966
Spliceosome [BR:cpap03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110824966
 Complex B
    110824966
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Tafi-CsgC
Other DBs
NCBI-GeneID: 110824966
NCBI-ProteinID: XP_021911140
LinkDB
Position
Unknown
AA seq 374 aa
QIPETNAAVPGMFPNMFSLATGQLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSV
ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGVPV
KVRRPTDYNPALAATLGPSQPNPNLNLAAVGLASGSTGGLEGPDRIFVGGLPYYFTEAQI
RELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDTACLTLNGIKMGDKTLTVRRA
SEGTSQPKPEQENILLHAQQQIALQRFMLQPSGMPTKIVCLTEVVSADELKDDEEYEDIL
EDMRQEGGKFGKLANVIIPRPRLDGEPAPGVGKVFLEYEDAEGASKARSGMNGRRFGENQ
VVAVFYPEDRFAQM
NT seq 1124 nt   +upstreamnt  +downstreamnt
ctcaaattcctgaaacgaacgcagctgttcctggaatgtttcccaacatgttctccttgg
cgactggtcagttgggtgctcttcctgtcatgccagttcaggccatgactcagcaggcaa
ccaggcatgctcgccgagtttatgttggaggtcttccccctacagcaaatgagcagtcgg
tggcaaccttttttagccaggttatggctgctattggtggaaatactgccgggccaggtg
atgctgttgtcaatgtgtacataaaccatgaaaagaagttcgcttttgtggagatgagat
ctgttgaggaggccagtaatgcaatggctttagatgggattatatttgagggagttccgg
tgaaggtgaggagacctactgactataatccagcccttgccgcaactcttggtcctagcc
aacctaatcccaatctcaatttagctgcggttggcctggcttcgggttccacgggtggtc
ttgagggtccagaccgcatttttgttggtgggcttccctattacttcacggaagcacaga
tcagggagttgttggagtcttttggaccccttcgaggctttaatcttgtcaaagatagag
aaaccggaaactcaaaaggctatgccttctgtgtttatcaggatccttcagttacagaca
cagcttgtcttacgctgaatggaattaaaatgggtgataaaactcttacagtcaggcgtg
ctagtgaggggactagccaacctaaacctgaacaagaaaatattctattgcatgcacagc
agcagattgcattgcagaggtttatgttacaacctagcggaatgcccaccaaaattgtat
gcctgactgaggtagttagtgcagatgaactcaaagatgatgaagaatatgaagacatat
tggaagacatgagacaagaaggcggaaaatttgggaagttggcgaatgtgattattccac
gtccaaggctagatggtgaaccagcacctggggttggaaaggtgttcttggaatatgaag
acgccgagggtgcatcaaaagccagatcggggatgaatggaaggaggtttggtgagaatc
aagtcgtggcagtgttttatccggaggacaggtttgcccagatg

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