Carica papaya (papaya): 110825013
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Entry
110825013 CDS
T05151
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110825013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110825013
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
110825013
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
110825013
NCBI-ProteinID:
XP_021911179
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MGDEMRVPSTPNNINNHDTTHQSTTDQPQVVGLYPLSCYYFGSTQPLSFKDETLADRVQR
FKLNYAAHGLRTRVEGILLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIDGLKRKLS
RKLYVSEDGNESDWEVGECVGMWWRPDFETLLYPSLSPTVKKPKECIKLFLVRLPESRKF
IVPKNLKLLAVPLCQIHDNYKTYGPIISGIPQLLSKFSFNIIEC
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaaatgagagtaccatccacaccaaacaacatcaataaccatgatactact
catcaaagcaccaccgatcagcctcaggtggtcggcttgtaccctctgagttgctactac
tttggatccacccaacctctttctttcaaggatgagacgttagctgatcgtgttcagaga
ttcaaactcaactatgctgctcatgggttgagaactcgtgttgaagggattcttttggtt
gagttgttcaagcatccccacttgttactgcttcaagtaagaaactccatcttcaagctc
cctggtggtcggttaagaccaggtgaatcagatatcgatggattgaaacgcaagttgtct
aggaaactttatgtcagtgaagatggtaatgaatctgattgggaggtgggagaatgtgtt
ggaatgtggtggagacctgattttgaaaccctgttatatccgtccttgtcacctactgtg
aaaaaaccaaaggaatgcataaaactcttcctcgtgaggttaccagagagtcgaaagttc
attgtgccaaaaaacctgaaattgcttgcagtccctttgtgccaaatacatgacaattac
aagacatatggaccaataatatcaggaattccccagctgttatctaaattctccttcaac
ataattgaatgttaa
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