Carica papaya (papaya): 110825041
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Entry
110825041 CDS
T05151
Name
(RefSeq) LOW QUALITY PROTEIN: RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110825041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110825041
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110825041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
110825041
NCBI-ProteinID:
XP_021911202
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MDPSVQTFQHRSLSVKLWPPSQSTRLMLLERMVKNLTTPSIFSRKYGLLTKEEAEEDAKE
IEEVAFTAANQHFQKEPDGDGSSAVQIYAKESSKLMLDVIKRGPKVREDGEVRIERAAGL
ETVFDISGGRRAFISAEEAEELLSPLREPGNSYTKICFSNRSFGLDAANVAAPILLAIKD
QLRDLDLSDFIAGRHETEALEVMNIFSSALEGCQLRYLNLSNNXXXXXXXXXXXXXXXXX
XXXXXEEAAQAVHELIPSAKMLKVLRFHNNMTGDEGAIAISKIVKRSHALEHFQCSSTRV
GSEGGVALAEALRTCTNLKKLDLRDNMFGVEGGLALSKAISVFADLTEVYLSYLNLEDEG
IEALAHALKDSAPSLEVLEMAGNDITAKGAAYLSPCILSKQFLSKLNLSENELKDGGAII
IGKALKEGRGQLTEVDLSTNLIRRAGARFLARAVVNKSGFKLLNINGNFISEEGIDELND
IFKNSPDMLGPLDENDPEGEDIDEEAEEENAEHDHELESKLKGLKIKQEE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcagtgcagactttccaacaccgctcactatctgtcaagttgtggcccccc
agtcagagcactagactaatgcttttggagcggatggtcaagaacctaacaactccatct
attttctcgagaaagtatggtttgctgaccaaggaagaggctgaggaagatgcaaaagaa
attgaagaggtagcttttacagctgcaaaccaacactttcaaaaggagccagatggtgat
ggaagttcggcagttcaaatttatgccaaagaatccagtaagctcatgcttgatgttatt
aaaagaggcccaaaagtgagggaggatggagaggtgaggatagaaagagctgctggcctt
gaaactgtctttgatatttctggaggccgaagagcatttatcagtgcagaggaggctgaa
gaacttttaagtcccttaagggagccagggaactcgtatactaaaatttgtttcagcaac
agaagttttggcttggatgcagccaatgtagctgcacctatcttgttggccattaaggat
cagttgagagacttagacttatcagattttattgcaggaaggcatgaaacagaagctctt
gaagtcatgaatattttctcttcagctttggaaggttgccaattgaggtatttgaacctt
tcaaacaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnagaggaggctgcgcaagctgttcacgagctaattccttccgctaag
atgctcaaagtccttcgatttcacaataatatgacaggagatgaaggtgcaattgctatc
tctaagattgtgaaacgttctcatgctttggagcatttccagtgctcttctactagggta
ggttcagaagggggtgtcgctctggctgaagcactcagaacgtgcaccaatttgaagaaa
cttgatctacgtgataatatgtttggagtagaaggtggattggctctcagtaaggccata
tctgtatttgcagacctgactgaggtttatctcagttatctgaatctggaagatgagggg
atagaagcacttgcacatgctctcaaggattctgcaccttcacttgaagttctagaaatg
gcagggaatgacattactgccaagggtgctgcttatttatcaccctgtattttgtcaaaa
caatttctttcgaaattgaacttgtctgaaaatgagctgaaggatggaggtgctattata
attggaaaggcattaaaggagggccgtggccaattgactgaagttgacttgagcacaaac
ctaatcaggagggctggggcaaggttcttggcacgggctgttgttaacaagtctggattt
aagctgctaaacatcaacggcaatttcatttccgaggaagggattgatgaattaaatgat
atattcaagaactctcctgatatgctcgggcctttggacgagaatgatcctgaaggagaa
gatatcgatgaggaagctgaagaggagaatgcggaacatgatcatgagctggaatcaaaa
cttaagggcctgaaaatcaagcaagaggaataa
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