KEGG   Carica papaya (papaya): 110825125
Entry
110825125         CDS       T05151                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110825125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110825125
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110825125
SSDB
Motif
Pfam: MutS_III MutS_IV MutS_II MutS_I DUF6437
Other DBs
NCBI-GeneID: 110825125
NCBI-ProteinID: XP_021911277
LinkDB
Position
Unknown
AA seq 620 aa
DPRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGGRSDGLSSVSVSRNMFETIAR
DLLLERMDHTLELYEGSGSNWRLVKSGTPGNLSGFEDVLFANNEMEDTPVVVALLPNFRD
NGCTVGLGYLDLTKKILGLTEFLDDSHFTNVESALVALGCKECLLPTESGKSNEFRTLND
AFSRCGVMVTERKKSEFKARDLVQDLGRLVKGSIEPVKDLVSGFEIAPAALGALLNYAEL
LSNESNYGNYTIRRYSLNSYMRLDSAAMRALNIMESKTDANKNFSLFGLMNRTCTAGMGK
RLLHMWLKQPLLDCTEINCRLDMVQAFVEDTALRQNLRQHLKRISDIERLIHNLQKKRAG
LQHIVKLYQSSIRLPYIRSAIEQYDGEFSALIKERYLDPLELLTDDDHLNKFIALVETSV
DLDQLDNGEYMISSSYDSALSALKEEQESLEQQIHNLHKQTALELDLPLDKALKLDKGTQ
FGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDRYQKILDDYKNCQKE
LVNQVVQTAGTFSEVFESLAGLLSELDVLLSFAELASSCPTPYTRPNITSSVTTFFFFFY
YILFLVFMLFALFFKYLHPM
NT seq 1860 nt   +upstreamnt  +downstreamnt
gaccctagggctgttcgcttctttgatcggcgggattattatactgctcacggtgaaaat
gccacttttattgcaaaaacatactatcatacaaccactgctttgaggcaacttggtggc
agatctgatggcctctccagcgtaagtgttagtagaaacatgtttgaaactattgcccgt
gatcttcttctagagagaatggaccatactcttgaactctatgaaggtagtggctccaat
tggagattagtgaaaagtggaactcctggaaatcttagcggttttgaagatgtcttattt
gccaacaatgagatggaggatacacctgtggttgtggccttacttccaaacttccgtgac
aatggctgcacagttggcttggggtatcttgatttaactaagaaaatacttggattaact
gaatttcttgatgatagccactttacaaatgttgaatcagctttggtcgctcttggttgt
aaggaatgtcttttgcctactgagagtggaaaatcaaatgaatttagaactctgaatgat
gctttctccagatgtggtgtgatggtaacagaaagaaaaaaaagtgagtttaaagcgaga
gatttggtgcaggatctgggtcggcttgttaagggctcaattgagccagttaaagattta
gtttctggatttgaaattgcacctgctgctttaggtgcactactaaactatgcagaatta
ctctcaaatgagagcaattatggaaattataccatccgaaggtacagtcttaacagctat
atgagattagattcggctgctatgagggcgcttaatatcatggaaagcaaaactgacgca
aataaaaattttagtttgtttggtctcatgaatagaacctgcactgctggtatggggaaa
cgattacttcatatgtggctaaaacagcctttattagattgtactgaaatcaactgcagg
ctagatatggtgcaagcatttgttgaagatactgctcttcgccaaaatctgaggcagcat
ctcaaaagaatctctgatatagaaagactgatccacaatcttcagaagaaaagagctggt
ttgcagcatattgtaaaactttatcagtcaagtataaggcttccctacattcggagtgct
atagaacagtatgatggagaattttcagcattgatcaaggagagatatttggaccccctt
gagttgttgactgatgatgatcacttgaataagttcattgctcttgtagaaacatctgtt
gatcttgatcaacttgataatggggagtatatgatttcatctagttatgactctgcacta
tctgcactgaaagaggagcaagagtcactcgagcagcaaatacacaatttgcataagcaa
actgctcttgagcttgatctaccgttggataaggcactaaagttggataagggcacacag
tttgggcatgtatttagaattacaaagaaggaagagccaaaaataagaaaaaagctcaca
acccaatttattgtcctcgaaacacggaaagatggtgtaaaatttacaaatacgaaactt
aaaaaattaggtgatcggtaccaaaagattcttgatgattacaagaattgtcaaaaagag
ctggttaaccaggtggtccaaactgcaggaactttttctgaggttttcgaatcattggct
ggattgctctccgaattggatgtcttgcttagttttgctgagttggcatccagttgtcct
actccatacactagacccaacatcacctcatcagtaactactttctttttttttttttac
tacattttgtttcttgtcttcatgcttttcgctttgttttttaaatatcttcatcctatg

DBGET integrated database retrieval system