KEGG   Carica papaya (papaya): 110825874
Entry
110825874         CDS       T05151                                 
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110825874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpap03009]
    110825874
Ribosome biogenesis [BR:cpap03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    110825874
SSDB
Motif
Pfam: Utp12 ANAPC4_WD40 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_ACSF4 Beta-prop_WDR5 Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Tricorn_2nd PQQ_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Hira DUF3864 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 110825874
NCBI-ProteinID: XP_021912091
LinkDB
Position
Unknown
AA seq 628 aa
MAKEKLKPLLTSFTPDGDILAIFSPNGTVKICKTSNGNLLAEWKWSDDGLIGAFSCMACC
FLGKKRKKQQGTCLLAFGTSNGDIWTVDALTGESKWKSMECCRDGFAGLTFVKKGHDLCA
VGVNGKAFVMDSETGELIKKFKASKGPISSLAFSCDEKFVAIAGGKMRIIDLENGKELVK
YSNDLGHLQYISISDDAKMIVTSEAGEKNLQVWSCDLSSKTITKGPVLSMARSPLALECK
VCTNEQNGPVVLALSKSGVAYIWNLKVTSQEEVTPAKITVNSNKTESDNQNSSSGKKSST
SIMTARLHAVEEKRIIALVAYGSTVYLQISMVNVSNPGDDIVITARDESGIYKGNGISAG
EDLNNSLPETLGTPPQSRRTNKKRTAPDPDLPTAIGVDDAGHGEDVDGVLVNNNENEPTM
GEKLASVKLLENDKTENHEKEDSSPRAKPPSADSVNILLKQALHADDRALLLDCLYNQDQ
KVIANSISLLNSSDVLKLLNSLVSIIQSRGAVLACALPWIKSLLLQHASGIMSQESSLLA
LNSVYQLIESRVATFQSALEISSCLDLLYSGIVGDEVEESDTIPVIYEDKDESDEEESEE
AMETDDDSNEEGAFDGVSDFEEIDDMSE
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggccaaggagaaattgaagcctttattgacatctttcactcccgacggtgatatcctc
gcgatcttttccccaaatgggactgtcaagatctgcaagacaagcaatggaaatttatta
gcagagtggaagtggtcagatgatggtcttattggtgcattttcatgcatggcgtgttgc
tttcttgggaagaagaggaaaaagcagcaaggcacgtgcttattagcttttgggacaagt
aatggggacatctggactgttgatgctttaactggtgaaagcaagtggaaatccatggag
tgctgccgtgatggatttgctggtctcacttttgtgaagaaaggtcatgatctatgtgct
gttggagttaatgggaaggcatttgtgatggattcagaaactggagagctaataaagaag
tttaaagcttcaaaagggcccatttcttccttagctttttcttgtgatgagaagtttgtt
gccatagctggtggtaaaatgcggatcatagatttggaaaatggaaaggaacttgtgaaa
tattcaaatgatttgggtcatttgcaatacatatccatatctgatgatgccaagatgatt
gttacatcagaagctggggaaaaaaatcttcaagtgtggagttgtgatttgagctccaag
actattactaagggtccagttcttagcatggcacgttctccattagcattggaatgcaaa
gtttgtaccaatgagcagaatggtccagttgtcttagcactttctaaatctggtgtagct
tacatttggaatttgaaggtgacctcacaggaggaggtgactccagcaaagatcacagta
aattctaacaaaacagaatcagataatcaaaatagttctagtggaaagaaaagtagcact
tctattatgactgctagattacatgccgtagaagaaaaacggataatagcacttgttgct
tatggttcaacagtatatctacaaatcagtatggtcaatgtgagcaatccaggggatgac
attgttataacagctagagatgagtctggaatttacaaaggaaatggaatatctgcaggg
gaagatctgaataattcactgccggaaacattaggtactccaccacaaagcagacgaaca
aataagaagcgaactgcacctgatcctgatctcccaactgcaattggagtggatgatgct
ggtcatggtgaggatgtggatggggtcctcgtcaacaacaatgaaaatgagccaaccatg
ggtgagaaacttgcaagtgtaaaattgttagagaatgacaagactgaaaaccatgaaaaa
gaagattcctctcctcgtgcaaagcctcccagtgcagactcagttaatattttgcttaag
caagcactccatgctgatgaccgtgcacttctgttggattgcttgtacaaccaagatcaa
aaggttattgctaattcaatctcattattgaattcttctgatgttctaaagctcttgaac
tctcttgtctcaataattcagtcaaggggtgcagtcttggcatgtgctcttccatggata
aaaagtttactacttcaacatgccagtggaatcatgtcccaggaatcatctttactggca
ctgaactcggtctatcagctaattgaatccagagttgcaacttttcaatcagctctagaa
atctctagttgcttggacttactttattcagggattgtgggtgatgaggtggaagagagt
gacactatccctgtgatatatgaggacaaggatgaaagtgatgaagaggaatctgaagaa
gccatggaaactgatgatgatagtaatgaagagggagcttttgatggggttagtgatttt
gaagaaattgatgacatgagcgaatga

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