Citrobacter pasteurii: CUC49_00915
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Entry
CUC49_00915 CDS
T05874
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpar
Citrobacter pasteurii
Pathway
cpar03030
DNA replication
cpar03430
Mismatch repair
cpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUC49_00915
03430 Mismatch repair
CUC49_00915
03440 Homologous recombination
CUC49_00915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpar03032
]
CUC49_00915
03400 DNA repair and recombination proteins [BR:
cpar03400
]
CUC49_00915
Enzymes [BR:
cpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUC49_00915
DNA replication proteins [BR:
cpar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUC49_00915
DNA repair and recombination proteins [BR:
cpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUC49_00915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AYL60316
LinkDB
All DBs
Position
208395..211877
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVRSELLGDELTQLTVLAANNTGYQNLTLLISKAYQRGYGAEGPVIDRDW
LVELKDGLILLSGGRMGDVGRSLLRGNNALVDECVAFYEEHFPDCYFLELIRTGRQDEEN
YLHAAVALAETRGLPVVATNDVRFLETGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSREGL
EERLEFLFPDPEVRAQKRPPYDERLEVELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLSDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCTPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGHRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacctcgtttcgtccacctgcgggtgcacagcgactactccatgatcgatggg
ctggcgaaaaccgggccgctggtgaaaaaggcggccgcgttgggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggtctggtgaagttttacggagcgggtcatggcgca
ggtattaagccgattgttggcgcagattttcatgtccgtagcgaactattgggtgatgaa
ctcacgcaactgactgtactggctgctaataatacgggctaccagaacctgacgttgttg
atatcaaaagcctatcagcgcggctatggtgcagaagggccggtgatcgacagagactgg
ctggttgagctaaaagacgggttaatcttgctttccggcggccgtatgggcgacgtcgga
cgcagcctgttgcgtgggaacaacgcactggtcgacgagtgcgtggcgttttatgaagag
catttccctgattgctacttccttgagctgatccgtaccggtcgacaggatgaagaaaat
tacctgcatgctgcagtagcgctggccgaaacacgcggcctgccggtggtcgcgaccaac
gatgttcgcttccttgaaaccggtgactttgacgcgcatgaaatccgcgtagcaatccac
gacgggttcactcttgatgatcccaaacgcccgcgtaactattcgccgcagcagtacatg
cgcagtgaagaggagatgtgcgagctgttctccgatatcccggaagcgctggaaaacacc
gtcgagattgccaaacgttgcaacgtgacggtgcgcctgggtgaatacttcctgccgcag
ttcccgactggcgacatgaccaccgaggatttcctcgtcgcgaaatcgcgtgaaggcctg
gaagaacgtctggaatttttgttccccgatcctgaagttcgcgcgcagaagcgcccgcct
tatgatgaacgtctggaagttgaacttaaagttatcaaccagatgggcttcccgggttac
ttcctgatcgtaatggaatttatccagtggtcgaaagataacggtgtaccggtaggccct
ggacgtggttccggtgcaggctcgctggtggcctacgcgctgaaaattaccgaccttgat
ccgctggaattcgacctgctgttcgaacgtttcctgaacccggaacgtgtctcaatgccc
gacttcgacgttgacttctgtatggagaaacgcgaccaggtcatcgaacacgtggcggaa
atgtacggtcgtgatgcggtttcgcagattattaccttcggtacgatggcggcaaaagcg
gttatccgcgacgtgggccgcgtactgggtcacccgtatggctttgttgaccgtatttcg
aaactggtgccgcccgatccgggcatgacgctggctaaagcctttgaagccgaacctcaa
ctgccggaaatctatgaggcagatgaagaggttagagcgcttattgatatggcgcgcaag
ctggaaggtgtcacgcgtaacgcgggtaagcacgccggtggcgtggttatcgcaccgacc
aaaattaccgattttgcgccgctgtactgcgatgagcaggggctgcacccggttacccag
tttgataagaacgacgtggaatacgccggcctggtgaaattcgatttcctcggtctgcgt
acgctcaccatcattaactgggcgctggagatgatcaacgcgcggcgtgagaagaacggc
gaaccgccgctggatatcgccgcgattccgctggacgacaagaaaagttttgacatgctg
caacgctcggagacaacagccgtcttccagcttgaatcccgcggcatgaaagatctgatc
aaacgtctgcagcctgactgcttcgaagatatgatagccctggtggccctgttccgaccg
ggtccgctacagtcagggatggtagataactttatcgaccgtaagcatggccgtgaagag
atttcctacccggacgtacaatggcagcatgagtgtctgaaaccggtactggagccgacc
tacggcattatcctgtatcaggaacaggttatgcagattgcccaggagctgtccggatac
acccttggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcacctttgaagagggggcgaaaaagcgcggcgtagacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacggatttaacaaatcgcac
tccgctgcctatgcgctggtttcttaccagacgctgtggctgaaggcgcattatcctgcc
gagtttatggcggcggtaatgaccgccgatatggataacacagagaaagtcgtcggactg
gtggatgaatgctggcgcatggggctcaaaatcctgccgccggacatcaactccgggctt
tatcattttcacgtgaatgatgatggcgagattgtctacggcatcggcgcgataaaaggc
gtgggtgaagggccaattgaggctattattgaggcgcgaaatgaaggtggttacttccgc
gagctgtttgatctctgtgcgcgtacggatatcaaaaaactcaaccgccgggtgctggaa
aagctaatcatgtccggggcgtttgaccgccttggtccgcatcgcgctgcgttgatgaac
tcgctcagcgatgccctaaaagccgccgatcagcatgcgaaagccgaggcaattggtcag
gctgatatgtttggcgtactggcggaagagccggaacaaattgaacagtcttatgccaac
tgtacgccgtggccggagcaggtggtattagacggtgagcgtgaaacgttaggtctttac
ctgacgggacatcctatcaatcagtatttaaaagaaattgagcgctatgttggaggccac
aggctgaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtc
attgctgcgcgggtaatggtcaccaagcgcggcaatcgtatcggcatctgtacactggat
gaccgttccgggcgtctggaagtgatgttatttaccgatgctctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgatggcccgtgaagtcatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcgcgtgcgcgtttgcgttttggcgcaacgtggcgtgtctctccgagcgat
cgtttgctaaacgatctccgtggccttattggttcggagcaggtggaactggagtttgac
taa
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