Citrobacter pasteurii: CUC49_01680
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Entry
CUC49_01680 CDS
T05874
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpar
Citrobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpar03400
]
CUC49_01680
DNA repair and recombination proteins [BR:
cpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUC49_01680
Archaeal homologous recombinant proteins
CUC49_01680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
AAA_21
cobW
AAA_15
ABC_ATPase
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AYL60450
LinkDB
All DBs
Position
complement(371942..375085)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVRGEAYRAFWSQNRARNQPEGNLQVPRVELARCA
DGKILADKVKDKLEMTAELTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKAARTELEKLQAQASGVALLAPEQVQSLTESLQVLTDEEKQHLTRQQ
IQQQHLNWLIRQNELQAEVSRHQQALQTAKEAQDKAQPQLATLSLAHPARALRPYWERIQ
EQSSTLRRTRQNIQEVNTRLQSSLALRGRIRQQAQKQSATLLTEQQALTDWLNEHDRFRL
WSSELAGWKALLAQQSDANEQLRQWQKLRDSDVRKLDALPLPSLALSAQEVTVALAQHSQ
LRPLRQQLSNLHGQIAPKQKQLVQLRTTIQQRQQEQAQRNTALAEKRQRYKDKNQHLTDV
KTLCEQEARIKDLESQRALLQSGQPCPLCGSTTHPAIEHYQTLELSVNQARREALEKEVK
TLADEGSTLRGQLDAITQQLQRDEREVQTLSQEEQALTKEWQTLTTSLNITLQPQDDIAP
WLAAQEEHEQQLHQLSLRHALQAQITAHSEQITQLQLHIEQRQTTLLAELARYGLSLPAD
DDITAWLNARVGEAQMWQRRQNELTELQAKMAQLAPLLETLPETGAKEETTESLALENWR
QVHDDCLSLQGQWQSLQQQEAQEAQRAAEIQAQFDSALQASVFDDRDTFLAALLDEEAFN
HLEQLKQSLEGQRQQAQTLLNQAQQALATHQQQPPAGADLTLTVDYLRDALAQLTQQLRD
NTTRQGEIRQQLRQDAENRQQQQTLMQEIEKASLLVEDWGYLNALIGSKEGDKFRKFAQG
LTLDNLVWLANNQLTRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDKMFAVE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgtctgaaaaacctcaactctctgaaaggggaatggaaagtt
gatttcacggcagagccttttgccagcaacgggctgttcgccatcaccggtccaaccggt
gccgggaagaccaccctgctggacgccatttgcctcgcgctgtaccacgaaacaccacga
ctcaataccgtatcgcagtcgcaaaacgacctgatgactcgcgatacggcggaatgtctg
gccgaagttgaattcgaagtcagaggcgaagcctatcgcgcattctggagccagaaccgc
gcgcgcaatcaaccagaaggtaacctgcaggttccgcgtgtcgaactggctcgttgcgcc
gatggcaaaattctcgccgataaagttaaagacaagctggaaatgaccgccgagcttacc
gggctggattacggccgttttacccgctcgatgctgctgtctcagggccagtttgccgca
tttctcaatgccaaaccgaaagagcgcgccgaactgctggaagagctgaccggcacagag
atttacggccaaatctccgccatggtgtttgaaaagcacaaagcagcgcgtacggagctg
gaaaaactgcaggcccaggccagcggcgtggcgctgttagcaccagagcaggtacagtct
ctgacagaaagtttgcaggtacttactgacgaagaaaaacagcatcttacccgtcagcaa
atccagcaacagcatcttaattggctcatccgacaaaatgagctacaggcagaagtaagc
cgccaccagcaagcattacagaccgcaaaagaggcgcaagataaagcacaaccgcagctg
gcgacactcagcctggcacatcccgccagagcattgcgtccgtactgggagcgaattcag
gaacaatcctccacgctccgccgaacacgacagaatattcaggaagtgaatactcgctta
caaagcagcttagcgctgcgcgggcgcatccgtcagcaggcacaaaaacagtcggcgacc
ctgctcaccgaacagcaggcgctaaccgactggctgaacgaacatgaccgtttccgctta
tggagcagcgaactggcaggatggaaagcgctattggcacagcaatctgacgctaacgag
cagctacgtcagtggcaaaaactacgcgacagcgacgtgcgcaagctggatgcactgccg
cttccctcgttggcccttagcgcgcaagaggtcacggtagcgctggcgcagcactcacag
ttgcgtccattacgccagcaactgagcaatctgcatggacaaattgcgccgaaacaaaaa
caactggtacagctacgcaccacaattcagcagcgccagcaggagcaagcacaacgcaac
acggccctggcagaaaaacgtcagcgctataaagataaaaatcagcatctgaccgatgtg
aaaacgctctgcgaacaggaagcacggattaaagatctggaaagccagcgtgctttactg
cagtccggacagccttgtccgctttgtggctccacgacgcatccggccattgagcactat
cagaccctcgaactcagcgtcaatcaggcgcggcgtgaggcattagaaaaagaggtcaaa
acgctggccgatgaggggtcaacgctacgcgggcagctcgacgcgataacccaacagcta
cagcgcgatgaacgcgaggtacagacgctttctcaggaggagcaagcacttactaaagag
tggcagacgctgactaccagtctgaacataacgttgcaaccgcaggatgatatcgccccc
tggcttgcagcccaggaagaacacgaacaacagcttcaccagttgagcctgcgtcatgcc
ctgcaggcacaaattactgcacattccgaacagataacccagcttcaactgcatattgaa
cagcggcagactacgcttctcgctgaattagcccgctacggtctgtcgcttcctgccgat
gacgatatcaccgcctggcttaacgcacgtgtgggcgaagcgcagatgtggcagcgtcgc
caaaatgaactgaccgagctccaggcgaaaatggcacagcttgcgccattgctggaaaca
ttgcccgaaaccggcgcgaaggaagaaacgacagaaagcctggcgctggaaaactggcgg
caggtgcacgatgactgcctctcattacagggccagtggcaatcgttgcaacagcaggaa
gcccaggaggcacaacgcgcagcagagattcaggcacagtttgatagcgcattgcaggcc
agtgtttttgacgatcgcgacaccttccttgccgccctgcttgatgaagaggcgtttaac
catcttgagcagcttaagcaatcgctggaaggccagcgacagcaggcgcaaacgctgctt
aaccaggctcagcaggcgctggcaacgcatcagcagcaaccgcctgccggcgcggatctc
acactcaccgtggactatcttcgcgatgcactggcgcagctcacgcaacaactgcgggat
aacaccacgcgccagggcgaaattcgccagcagctcaggcaggatgccgaaaaccgccag
cagcagcagaccctgatgcaagagattgaaaaggcctcactgctggttgaagactggggt
tacctgaatgcgctgatcggctcgaaagaaggtgataaattccgcaaatttgcccaggga
ctgacgctggataacctggtctggttggccaacaaccagttaacccgcctgcacggtcgc
tatctgttgcaacgcaaggccagtgaggcgctggaacttgaagtggtggatacctggcaa
gccgatgccgtgcgtgatacccgcacgctctccggcggcgagagcttcctcgtgagcctg
gcgctggcgctggcgttgtccgacctggtcagtcacaaaacacgtattgactccctgttc
ctcgacgaaggtttcggcacgctggacagtgaaacgctggataccgccctcgacgcgctg
gatgccctgaacgccactggcaaaaccattggcgtgataagccacgttgaagcgatgaaa
gaacgtattcccgtgcaaatcaaggttaaaaaaatcaatggattaggttacagcaaactc
gacaagatgtttgcggtggagtaa
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