KEGG   Citrobacter pasteurii: CUC49_07090
Entry
CUC49_07090       CDS       T05874                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpar  Citrobacter pasteurii
Pathway
cpar02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cpar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CUC49_07090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpar03021]
    CUC49_07090
Transcription machinery [BR:cpar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CUC49_07090
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like Sigma70_ECF HTH_23 HAC6_helical PCI HTH_36 PP1_inhibitor HTH_28 HTH_24 HTH_11 HTH_7 HTH_3 TnsD HTH_40
Other DBs
NCBI-ProteinID: AYL61416
LinkDB
Position
complement(1473403..1473924)
AA seq 173 aa
MSDRATTTACFTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMGSDSLKTVRD
PRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPENLAPSPEERESQLETLQLIDSMLDG
LNGNTREAFLLSQLEGLKYSEIALKLGVSVSSVKKYVAKAIEHCLLFRLEHGL
NT seq 522 nt   +upstreamnt  +downstreamnt
atgtctgaccgcgccactactaccgcttgcttcacgttcgagtcgctttatggcacacat
cacggctggctgaaaagctggctgacgcgcaagctccagtctgcctttgatgctgatgat
attgcccaggacacatttttacgggtaatgggcagtgactcgctcaagactgtccgcgac
cctcgttccttcctgtgcactatcgccaaacgggtaatggtcgacctgtttcgccgaaac
gcgctggaaaaagcctatctggagatgctggcgctgatgccggaaaatctcgcgccttcg
cccgaggaacgtgagagccagctcgaaaccctgcaactcatcgacagcatgcttgacggc
ctgaacggaaacacacgcgaagcgtttttgctttcgcaactggaggggctcaaatacagc
gagatcgcgcttaagctcggcgtctccgtcagctcggtgaaaaagtatgtggcaaaggct
atcgaacattgtctgctgtttcgtctggagcacggcctgtga

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