Citrobacter pasteurii: CUC49_08785
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Entry
CUC49_08785 CDS
T05874
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cpar
Citrobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpar03016
]
CUC49_08785
Enzymes [BR:
cpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CUC49_08785
Transfer RNA biogenesis [BR:
cpar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CUC49_08785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
OSR1_C
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
AYL61730
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All DBs
Position
1808451..1810385
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKDRESAEPEELIEPFLTRFVGKVQGKNDRLSIAPDHPLLKDAIPCRAARGVEH
EFKEGDWAVAEMRRHPLKGDRTFYAELTQFITFADDHFVPWWVTLARHNLEKEAPDGIAT
EMLDEGLVREDLTALNFVTIDSASTQDMDDALYAEEQTDGKLQLTVAIADPTAWIAEGSK
LDNIAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEIRPVLACRMSITADGTIEDNITF
FAATIESKAKLAYDNVSDWLEGTGDWQPENDAIAQQIHLLHRICLSRGEWRHNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHMGFD
PANAEALAALLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSYAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETISRPQDDTTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFAAEIIDVSRGGMRVRLIDNGAVAFIPAPFLHAVRDE
LVCSQESGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggacaacccgctgctagcgcagcttaaacagcaactacattcccagacgcca
cgtgctgaaggggtggtaaaagccacggaaaaaggctttggcttcctggaagtcgatgca
caaaaaagctatttcattccaccgccgcagatgaaaaaagtgatgcatggcgaccgcatt
gtggcggttatccatacggaaaaagatcgcgaatctgccgaaccggaagaactgatcgag
ccgttcctgacgcgcttcgtgggcaaagttcagggtaagaatgaccgcctgtccattgcg
ccggatcatccgctcctgaaagatgcgattccctgccgcgccgcgcgtggcgttgaacat
gaatttaaagaaggtgactgggctgttgcagaaatgcgtcgtcacccgttaaaaggcgac
cgcaccttctacgccgaattaacccaatttattaccttcgctgacgatcacttcgttccg
tggtgggtcacactggctcgccataatctggaaaaagaagcacccgatggcatcgccact
gagatgctggatgagggtctggtgcgtgaggacttaaccgcactgaacttcgtcaccatc
gacagcgccagtacgcaggacatggatgacgcgctttacgccgaagaacaaacggacggt
aaattgcagttaaccgtcgcgattgccgatcctaccgcctggattgctgaaggcagtaag
ctggataacattgcaaaaattcgtgcatttaccaactacctgccggggttcaacatccca
atgttgccgcgcgagctttcggacgatctgtgttctctgcgtgctaacgaaattcgcccg
gttctggcctgccgcatgagcatcactgctgacggcacgatcgaagacaatatcaccttc
ttcgcagcaacgattgaatcgaaagcgaagctggcctacgacaacgtctctgactggctt
gaaggcacgggtgactggcagccggagaatgacgcaattgcacagcagatccatctgctg
caccgtatctgtctcagtcgtggcgaatggcgccataatcacgctctggtattcaaagac
cgcccggattaccgttttgttctcggtgaaaaaggcgaagtactggatatcgtggcggaa
ccgcgccgcatcgcgaaccgcattgtggaagagtccatgattgcggcgaacatttgtgct
gcccgcgtactgcgcgacaagctgggctttggtatttataacgtgcatatgggattcgat
ccggctaacgcagaagcactggctgccctactgaaaacccatggtatgcacgttgatgct
gaagaggtcctgacgctggaaggcttctgtaaactgcgtcgtgaactggatgcgcagcct
tccggtttcctcgacagccgcatccgccgattccagtcttacgctgagattagcaccgag
ccgggtccgcattttggtctgggcctggaagcttatgccacctggacctcgcctatccgt
aaatatggcgacatgatcaaccatcgcttgcttaaggccatcatcaaaggtgagacaatt
tcccgcccgcaggatgatacgactttgcagatggctgaacgtcgccgcctgaaccgcatg
gccgagcgtgatgtgggtgactggctgtatgcacgttttctgaatgacaaagccggcacc
gacacccgctttgcggccgagattattgatgtcagccgtggtggtatgcgtgtacgttta
attgataacggcgcggtagcctttattccggcccccttcctgcacgcggttcgtgatgaa
ctggtgtgtagccaggaaagtggtacggtccagatcaaaggtgaggtggtttacaaagtt
actgatgtcattgacgtcaccatcgccgaagtgcggatggaaacccgcagcgtcatcgcg
cgccctgccgtataa
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