Citrobacter pasteurii: CUC49_09475
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Entry
CUC49_09475 CDS
T05874
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cpar
Citrobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpar03016
]
CUC49_09475
Enzymes [BR:
cpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CUC49_09475
Transfer RNA biogenesis [BR:
cpar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CUC49_09475
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AYL61852
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All DBs
Position
complement(1949860..1950987)
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AA seq
375 aa
AA seq
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MNYQMITTDDALATLCEAVREFPAIALDTEFVRTRTYYPQLGLIQLFDGKHVALIDPQGI
TDWSPLRDILRNTAITKFLHAGSEDLEVFLNTFGELPQPLIDTQILAAFCGRPLSWGFAA
MVEEFTGVVLDKSESRTDWLARPLTERQCEYAAADVWYLLPITTKLMAETDASGWLPAAL
DECRLMQQRRQEILAPEDAWREITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPEESLPQPLLNLMDM
PGYRKAFKAIKALVADVSAEQNLSVELLASRRQINQLLNWHWKLKPQASLPELISGWRGE
LMADRLKTLLLDYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcaaatgatcaccacggacgacgcgttggccacgctgtgcgaagccgttcgt
gaatttccggcgatagccctggataccgaatttgttcgcacgcgtacctactacccgcag
ttgggactgatccagctgtttgatggcaaacacgttgctctgattgacccgcaggggatc
accgactggtcgccgctgcgcgatatcctgcgtaacactgcgatcaccaaattcctgcat
gccggaagtgaagacctcgaagtgtttctcaacacgtttggtgagctcccgcaaccactg
atcgatacacagattctggccgccttttgtgggcgcccactgtcgtggggctttgctgcg
atggtggaagagttcaccggggtggtgctggataaaagtgaatcacgtaccgactggctg
gccagaccgctgactgagcggcagtgcgagtatgcggcggcagatgtctggtatttatta
ccgatcaccacaaaactgatggcagaaaccgatgcatccggctggctgcccgctgcgctg
gacgaatgtcgtttgatgcaacagcgtcgtcaggaaattctggcacccgaagatgcgtgg
cgagaaattaccaatgcctggcagttgcgtacccgtcagctcgcctgtctgcaactgctt
gccgactggcggttgcgcaaagcgcgtgagcgcgatctggcggtaaacttcgtggtgcgt
gaagagcatctgtgggcggtggcccgttatatgccgggcagtctgggcgagctggatagt
ctgggactttccgggagcgaaattcgcttccacggcaagacgctgatctccctggtagaa
aaggcacaggccttaccggaagagtcgctgccgcaaccgttgctgaatctgatggatatg
ccgggttatcgcaaggcattcaaagccattaaagccctggtggccgatgtgagtgcggag
cagaatcttagcgtggaactccttgcttcgcgtcgtcaaatcaaccaactgctcaactgg
cactggaaattaaagccgcaggcgtccctgccggagctgatttccggttggcgtggcgaa
ctgatggccgaccgcctcaagacgctgctgctggactatccacagtaa
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