Citrobacter pasteurii: CUC49_14195
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Entry
CUC49_14195 CDS
T05874
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cpar
Citrobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpar03016
]
CUC49_14195
Enzymes [BR:
cpar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CUC49_14195
Transfer RNA biogenesis [BR:
cpar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CUC49_14195
Prokaryotic type
CUC49_14195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AYL62707
LinkDB
All DBs
Position
complement(2900440..2901489)
Genome browser
AA seq
349 aa
AA seq
DB search
MTAFEDLTYLHGKPQGHGVLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRK
LRLGALKGNAFTLVLREVSERDDVEARLQAISERGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLSGRGSWFVATQEE
QTELQRRVDEKELMITAALPGSGEWGTQRDALAFEEAAIADETALQSLLLREKVDASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAYIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtttgaagatctgacgtatctccatggcaaaccacaaggccatggcgttctg
aaagcgaatccggaagactttgtcgtcgtcgaagatttaggctttgagccggatggcgaa
ggcgagcacattttggtgcgtatcctgaaaaacggctgtaacacccgttttgtcgctgac
gcgctggcgaaattcctgaaaattcacgcccgggaagtcagctttgctggccagaaagac
aagcatgcggtcacggaacagtggctgtgcgcgcgtgtaccgggcaatgcgatgcctgat
ttaagcaaatttgagcttgaaggctgtaaagtgctggagtacgcgcgccacaagcgtaag
ctgcgtttaggggcgctgaaaggcaacgcgtttacgctggtgttgcgtgaagtgagcgag
cgtgatgatgttgaagcgcgtttacaggcgattagcgagcgcggcgtaccgaactatttc
ggcgctcagcgttttggtatcggcggcagcaacctgcaaggggcgttgcgctgggcgcaa
agcgatgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcccgtagc
gcgttgtttaatcagatagtcagtgaacgcctgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattgtcgggacgcggaagctggtttgtcgccacacaggaagaa
caaactgaattacagcgtcgcgtcgatgagaaagaattgatgataacagcggcattgccg
ggtagcggtgagtggggaactcagcgcgatgcgctggcgtttgaagaagccgctattgct
gatgaaaccgcgctacagtctctgttattgcgcgagaaagtcgacgcgtcgcgacgcgct
atgttgctgtatccacaacaattaagctggaactggtgggatgacgtaaccgttgagttg
cgcttctggctaccggcaggtagcttcgccaccagtgttgtaagggaacttattaacaca
atgggtgattatgcgtatattgctgagtaa
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