Citrobacter pasteurii: CUC49_14345
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Entry
CUC49_14345 CDS
T05874
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cpar
Citrobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpar03009
]
CUC49_14345
Enzymes [BR:
cpar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CUC49_14345
Ribosome biogenesis [BR:
cpar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CUC49_14345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_11
MTS
UPF0020
Cons_hypoth95
Methyltrans_SAM
Methyltr_RsmB-F
Methyltransf_4
Ubie_methyltran
Methyltransf_15
Methyltransf_12
Methyltransf_23
PrmA
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AYL62735
LinkDB
All DBs
Position
complement(2932413..2933711)
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AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVNDLDSFGQGVARHNGKALFIPELLPQESAEVVITEDKKQ
FARAQVKRRLNDSSEREVPRCPHFGVCGGCQQQHASISLQQRSKSAALSRLMKCEVTEVI
ADTPWGYRRRARLSLNYRSKEQQLQMGFRKSGSSDIIDVKQCPILVPQLEALLPEIRACL
QSLQGLRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLEHFSHSQGLSLFLAPQSEILE
SNSEESPWYDSNGLRLTFSPRDFIQVNEGVNQKMVSCALEWLDVQPEDRVLDLFCGMGNF
TLPLAVRAASVVGVEGVPALVEKGRENARNNGLHNVTFFHENLEEDVTKQPWAMNGFDKV
LLDPARAGAAGVMQHIIKLNPGRVVYVSCNPATLARDSEALLNAGYTVRRLAMLDMFPHT
GHLESMVLFERL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacgacgcgtgacgacgcgtcagatcataaccgttacc
gtcaatgaccttgattcttttggtcagggcgttgctcgtcataacgggaaagccctgttt
ataccggaattgctgcctcaggaaagcgcagaagtggtgataactgaagataaaaaacag
ttcgcccgcgcgcaagtcaaacgtcgtttaaacgacagttcggaacgtgaagtgccacgt
tgtccacattttggggtctgtggtggctgtcaacagcagcacgccagcatctcgttgcag
cagcgtagcaaaagtgcagcgttatcgcgtttaatgaaatgtgaggtgacagaagttatc
gccgataccccgtggggctatcgacgccgcgcgcgtttaagtctgaactatcgctcgaaa
gagcagcaattgcagatgggatttcgcaagtccggctccagcgacattattgatgtgaag
caatgccctattttggtgccccaacttgaggcgttgctgcctgaaattcgggcatgcctg
cagagtctgcaggggctgcgtcacttggggcatgtcgaattggtgcaggctggaagtgga
actctgatgattttgcgccacaccgcaccattgagtgccgcggataaagaaaaactggaa
cacttttcgcattctcagggactgtctttgtttctggctccgcaaagcgagatactggaa
tcaaattcagaagaatcgccctggtatgattcaaatggactacgtttaaccttcagcccg
cgtgattttatccaggtcaatgaaggggtaaaccaaaaaatggtttcctgtgcgctggaa
tggctggatgtgcagccagaggaccgggtgctcgatttgttctgtggtatggggaatttt
acgttgccgttggccgtacgagcagcgagcgttgtgggtgttgaaggtgtccctgcgctg
gtggaaaaaggccgggaaaatgcgcggaataacggactacacaatgtgacattctttcat
gaaaaccttgaagaagatgtcaccaaacaaccatgggcaatgaacggatttgataaagta
ttgctcgatcctgcgcgtgcgggggctgccggcgtgatgcaacatattataaagttaaac
cctggccgcgttgtttatgtatcctgtaatcctgctacgctggctcgtgacagcgaagcg
ttactcaatgcaggatataccgttcggcgactggcgatgctcgatatgttcccgcacact
ggacatctggaatcgatggtcctgtttgagcgtttgtaa
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