Citrobacter pasteurii: CUC49_14545
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Entry
CUC49_14545 CDS
T05874
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cpar
Citrobacter pasteurii
Pathway
cpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CUC49_14545 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpar03400
]
CUC49_14545 (recD)
Enzymes [BR:
cpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CUC49_14545 (recD)
DNA repair and recombination proteins [BR:
cpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUC49_14545 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
MukB
AAA_28
UvrD_C
FtsK_SpoIIIE
CbiA
T2SSE
DO-GTPase1
DEAD
TrwB_AAD_bind
DUF6079_2nd
Motif
Other DBs
NCBI-ProteinID:
AYL62771
LinkDB
All DBs
Position
complement(2975395..2977224)
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AA seq
609 aa
AA seq
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MTIQKRLLEAVEQKQLRPLDAQFALAVAGNDNPAVTLAAALLSREAGEGHVCLPLSRLSL
REDAHPLLSAWLCEAGEPEDWSECLLASAAVSRGEQPTPLVLYGDRLYLNRMWHNERAVA
RFFGEVNHAIEVDEQRLTHTLAALFPPVEGVNWQKVAAAVALTRRISVISGGPGTGKTTT
VARLLAALIQMADGERCRIRLAAPTGKAAARLTASLGAALRELPLTDEQKKRIPDDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAFVGYGFTPERARQLSRLTESAIPAGSGTQAAALRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKIAIKTVFQQGFSDIEKRALHSSEDYAAMLEEALAGYGNYLD
LLRDRAEPDAVIQAFNEYQLLCALREGPFGVGGLNERIEQVMAQKRKIHRSTHSRWYEGR
PVMIARNDSSLGLFNGDIGIALDRGQGLRVWFALPDGSIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPNQHSPVVTRELVYTAVTRARRRLSLYADERILSSAIATRTERRSGL
SALFSDGIM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccagaaacgattgctggaggccgtagagcaaaaacagctccgtcctctggat
gctcagtttgcgctggcggttgccggaaacgacaaccctgccgttacgctggcggcggct
ctgcttagccgtgaggcgggcgaggggcacgtttgcttaccgctttcccggttgtcttta
cgcgaagatgcccatccgctgttgagcgcctggctgtgcgaggccggtgaaccggaagat
tggtcggaatgcctgctggcctccgctgcggtaagccgtggcgagcagcccacgccgctg
gtgctgtacggcgatcgcttgtatctgaaccgcatgtggcataacgaacgcgcggtggcg
cgttttttcggtgaagttaaccacgccattgaggtggatgaacaacggctgacccacacg
ctggcggcgctgtttccacccgttgaaggcgttaactggcaaaaagtggcggctgctgtg
gcgttgacccgccgtatatcggtgatctccggcgggccggggaccggaaaaacgacaacg
gtggcgaggcttctggcggcgttgattcagatggcggacggtgaacgctgtcgtattcgt
ctggcggcgccaacgggaaaagcggcagcccgtctgaccgcctcgctgggcgcggcgctg
cgagaactgccgctgaccgatgagcaaaagaagcgcattcccgatgatgccagtacattg
caccgattattgggcgctcagcctggaagccaacgcctgcggcatcatgcaggaaaccca
ctgcatctggacgtgctggtggtggatgaagcctcgatgatcgatttgccaatgatgtcg
cgccttatcgatgcgctaccgccacatgggcgggtgatttttcttggcgatcgcgaccag
ctcgcttccgttgaagcgggggcggtgctgggggatatctgtgctttcgtcggttatggc
tttaccccggagcgtgcccgccagcttagtcgcctgaccgaaagcgctattccggcaggt
tcgggaactcaggcggctgctctgcgcgacagtttgtgcctgctgcaaaagagctaccgt
ttcggtagcgattccggaatcggccagttggctgcggcgattaatcgtggtgataaaatc
gcgataaaaacggtcttccagcagggatttagcgacatcgaaaaacgcgctctgcacagc
agcgaggattacgccgcgatgctggaagaagcgctggcgggttatgggaactatctcgat
ttactgcgcgatcgtgccgagccggatgctgtcattcaggccttcaatgagtatcagcta
ttgtgcgccctgcgggaaggcccgtttggcgtgggtggcttgaatgaacgcattgagcag
gtgatggcgcaaaagcgcaaaattcaccgttcgacgcatagccgctggtatgagggaagg
ccggtaatgatcgcgcgcaatgacagttcgttgggattatttaacggtgatattggcatt
gccctcgatcgtgggcagggcctgagagtgtggtttgcgctgccggacggttctatcaaa
tcggtccagcccagtcgcttgcctgaacatgaaacgacctgggcaatgaccgtccataaa
tcgcagggatctgagtttgaccacgcggcgttaattttacccaaccagcactcacccgtg
gtgacccgtgagctggtctataccgccgtcacccgcgcacgccgtcgtttgtcactgtat
gccgatgaacggatattgagtagcgccattgccacccgaaccgaacgccgcagcggactg
tcggcgttgtttagtgatggcatcatgtag
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