Citrobacter pasteurii: CUC49_14560
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Entry
CUC49_14560 CDS
T05874
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cpar
Citrobacter pasteurii
Pathway
cpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CUC49_14560 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpar03400
]
CUC49_14560 (recC)
Enzymes [BR:
cpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CUC49_14560 (recC)
DNA repair and recombination proteins [BR:
cpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUC49_14560 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AYL62774
LinkDB
All DBs
Position
complement(2983826..2987194)
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEYIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDNDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPEWLTQWEVGLQVEGLGDAQAWQAPLWKALVEYTAELG
QPGWHRANLYQRFIQTLENTSDCPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAYLAKLLARQRRHSFEERHLPLFRDSQNAEGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQADILELENHAVAGVSLEEYSR
SDNKRLLEPNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIGSYSP
FIQAVFGSAPADRYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNINEEGLRYLRLWVNESGIRWGIDDDNVRELALPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGEAIPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPRRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDELLTSDQSEAKVKAHI
TRLHTRMPFDAQNYLPGEQQSYAREWLPAASLSGKAHTDFVQPLPFTMPETLTLETLQRF
WAHPVRAFFQMRLRVNFRSEESEIPETEPFILEGLSRYQLNQQLLNTLVEENDAERLFRR
FRAAGALPYGPFGEILWDTQRQEMQTLAERIIACRQPCQSMEIDLTCNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGTGESRLFLRKDGEWRFPPLEAEQALQYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAVNDAMLDDDDTLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDADTLETIVLQSQRYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttgatggaatatatc
gttgagcgcgagcggctggacgacccctttgaacccgagatgatcctggttcaaagcacc
ggtatggcgcagtggttgcaaatgactctggcacagaagtttggtattgccgctaacatt
gatttcccgctgccagcgagttttatctgggatatgtttgtgcgtgtattgccggatatc
ccaaaagagagcgcatttagcaaacagagcatgagctggaagctgatgacgctgctacct
caattgctggataacgacgatttcgcactgctacgccactatctcaccgacgacacagac
aaacgtaagctgtttcagctttcatcacgcgctgcggatctgttcgaccagtatttagtc
taccgtcctgaatggctgacgcagtgggaggtggggctgcaggtggaagggctaggagat
gctcaggcctggcaagcgccattgtggaaagcactggtggaatacacggctgaactggga
cagccaggctggcatcgtgccaatttatatcagcggtttattcagaccctggagaatacg
tctgactgcccacaaggcttgccctcgcgcgtctttatttgtggtatctccgcgctaccg
cccgtgtatctgcaggcattacaagcgctgggtaagcacattgatattcatctgcttttt
accaatccctgtcgttactactggggggatattaaagaccccgcttatctggctaaactg
ttggcgcgtcagcgtaggcatagctttgaagaacgacatttaccgctgtttcgcgatagt
cagaatgctgaaggactgtttaacagcgatggtgagcaggatgtggggaatccgatgttg
gcctcatggggaaaactagggcgtgactacatatatctgctttcggaattggaaaacagc
caggagctggatgcgtttgtcgacattactcctgacaatcttttgcataatattcaagcg
gatattctggaactcgaaaaccatgcggtggcaggagtcagcctggaggagtattcgcgt
agcgacaataaacggttgcttgagccgaatgatactagtgtgacgtttcatgtctgtcat
agcccacaacgcgaagtggaaatactccacgaccggttgctggcaatgctggaagcggac
ccaacgctgacgccgcgcgacatcatcgtgatggtggcggatattggcagctacagtcca
tttattcaggctgtctttggcagtgcaccggccgatcgttacctgccgtatgctatttcc
gatcgccgggcacgtcagtctcatcccgtcttacaggcgtttattagcctgctttcgcta
ccggacagccgctttgtttcggaggatgtgctggcattactggatgtgcctgtgctggct
gcgcgtttcaacatcaatgaagaagggttgcgctatcttcgtttgtgggtcaatgaatct
ggaattcgctggggcattgacgacgacaacgtgcgcgaactcgcgcttcctccaactggc
cagcatacctggcaatttggtttaacacgtatgctgctgggctatgcgatggaaagcgca
cagggggagtggcagtcggtattgccctatgatgagtccagtggtttgattgccgagtta
gtcgggcatttggcctcgttgctgatgcagctaaacatctggcgcagagggttagcacag
gaacgcccgctggaagagtggttacccgtttgccgggacatgcttaatgatttcttcctg
ccggacgcggacaccgaagcggcgatgacgctgattgaacagcagtggcaggccattatc
actgaaggtttgggggccgagtatggcgaggccataccgctgtctctgttacgtgacgaa
ctggcgcagcgtcttgaccaggagcgcatcagccagcgtttcctggcagggcctgtcaat
atctgtacgctgatgccgatgcgctctatccctttcaaagtggtgtgcctgttgggcatg
aacgatggcgtttatccgcgccagcttgcgccgctgggatttgatctgatgagccaaaaa
ccgaggcgtggtgaccgaagccgccgtgatgatgaccgctatctgttcctcgaagccctg
atttcggcgcaacaaacgctctatatcagctatatcggccgctcaatccaggataacagt
gagcgcttcccgtcggtgctggtgcaggaacttatggattacattgggcaaagccactat
ttgccgggcgatgaattactcactagcgatcaaagtgaagcgaaagtaaaagcgcacatt
acccgtttacatacccgtatgccctttgatgcacaaaactatctgccaggtgagcagcaa
agttatgctcgagagtggttgccagcggcaagtctgtcaggcaaagcgcacacggatttt
gtccagccgctcccctttacaatgcctgaaaccctgacgctggaaacgctgcaacgcttt
tgggctcatccggtgcgggcgtttttccagatgcgcctgagggtaaatttccgctctgaa
gagagcgaaatcccggaaacagaaccctttatcctcgaagggctcagccgctatcagctt
aatcagcagttgcttaataccctggttgaagagaacgacgctgaacgactgtttcgccgt
tttcgtgcggcgggtgcgcttccctatgggccatttggtgaaattctgtgggatacgcag
cgtcaggagatgcagacgctggctgaacgcattatcgcctgtcgtcagccttgtcagagc
atggaaatcgatcttacctgtaacggcgtgcaaatcaccggttggttgccgcaggtacaa
gaggacggtttgttgcgctggcgcccatctttgatcagcattgcgcagggtgtgcaactt
tggctggaacatcttgtctattgtgcgagtggcggtacgggagaaagccggttgttctta
cgcaaagacggcgagtggcgtttccctccactggaggccgaacaggcgttacagtatctg
tcgcaacttattgagggatatcgggaaggcatgtcatcgccgctactggtattaccggaa
agtggtggggcgtggataaaaacctgttatgacgccgtaaatgatgccatgttagatgac
gatgatacgttgcaaaaagcgcgcagtaagtttctgcaggcctatgaaggcaacatgatg
gtacgcggtgaaggtgatgacatctggtatcaacgtctgtggcgtcaactggatgctgat
acgctggagaccattgttttacagtctcagcgttacctgttaccgatttttcgatttaat
cagtcgtga
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