Citrobacter pasteurii: CUC49_16400
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Entry
CUC49_16400 CDS
T05874
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpar
Citrobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpar03016
]
CUC49_16400
Enzymes [BR:
cpar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CUC49_16400
Transfer RNA biogenesis [BR:
cpar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CUC49_16400
Prokaryotic type
CUC49_16400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AYL63097
LinkDB
All DBs
Position
complement(3340594..3341538)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVVARLGQRTDTSDADGQIVQERPVTFTAEQLASALETFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIVDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLRELVEQAEQQNIPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGDDGKFIGMGEMDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacattcacggtgttctgctgctggacaaaccg
caaggcatgtccagcaatgacgtactgcaaaaagtaaagcgcatctacaatgccaaccgc
gcggggcataccggcgcgctggatccgctggcgacaggcatgctgccgatttgcctcggt
gaagcgacgaagttttcacagtatttgctggattctgataaacgctatcgtgtggttgcc
cgtctgggccagcgtactgacacctcggatgctgatgggcaaatcgtgcaggaacgtccg
gtaaccttcaccgctgagcagcttgcaagcgcgctggagactttccgcggcgatatcgag
cagatcccgtcaatgtattcggcgctgaagtatcagggtaagaagctgtacgaatatgcg
cgtcagggtattgaagtgccgcgtgaagcgcgaccgattaccgtctatgagctgctgttt
atccgtcacgaaggtaacgaactggagctggaagttcactgttccaaaggcacctatatt
cgcaccattgttgacgatctcggtgagaagttgggctgcggcgcgcacgtcacgtatctg
cgtcgtttgacggtcagcaagtatccggtggatcgaatggtgacgctggaacatttgcgt
gagctggttgaacaggccgagcagcagaacattccggcagcacagctacttgatcctttg
ctgatgccaatggacagtccagcatcggactatcctgttgttaatttgcctttaacatcc
tcggtttactttaaaaatggtaacccggtacggacgtcaggcgcgccgctggaagggctg
gtccgcgtgacggaaggcgatgacggcaagtttatcggcatgggggagatggacgatgaa
ggtcgtgtcgccccccgtcgcctggtggttgagtatcctgcatag
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