Citrobacter pasteurii: CUC49_18980
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Entry
CUC49_18980 CDS
T05874
Symbol
dagR
Name
(GenBank) transcriptional regulator DagR
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
cpar
Citrobacter pasteurii
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpar03000
]
CUC49_18980 (dagR)
Transcription factors [BR:
cpar03000
]
Prokaryotic type
Helix-turn-helix
Other families
CUC49_18980 (dagR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
Mg_chelatase
AAA_16
NACHT
AAA_14
AAA_2
HTH_Crp_2
IstB_IS21
AAA_24
TrmB
AAA_25
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AYL63567
LinkDB
All DBs
Position
complement(3847333..3850131)
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AA seq
932 aa
AA seq
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MRRIEIILGELERLTRGLNLAHLAQETAFTAEAIGFNLGLARNSVSKDLNQLWNDGLAIK
SRGRPVFFLHRQAIETLLGRKLDESEREVQTVADLLPVQENQATEDPFSGLIGYDRSLRD
AVEKGRAAVLYPHGLHVLLTGPSGVGKTFFAELMHRFACERAVGASPPLVYFNCAEYAHN
PELLSSHLFGHRQGAFTGANENKPGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY
RPLGSSAVARSISVRLICATTEPVSSALLRTFQRRIQVCIDLPGIRQRSVEEQVELIVGF
LQRESRKIERTISIDRTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTEHSDTLQLD
KRLTEIPFNATPEQRLLVGALFEGKEHLSIDARTLPALKNSLATGAEIEESDLFYSFLTR
EYINLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIEERVTLLIGCVEQ
VLGFTLPENLINPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDEYDNATLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILIAHGATTATSQAQYVNRVLEREV
FSAIDMPFEQSVHDTLEALTQMIQTRQYRRLILMVDIGSLVHFGSTISKLFQIDVLLMPN
ITLTSLLEIGLDLSYETSDLPQLAALMQSKNIPCQLCTPQQENSGKVLVISCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNEVRSLERVQQAINASERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSSSERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEMEGVLNHLTTALSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENKPDLDNRAF
SVIKSAFLPIEEAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagacggattgagataatactgggggagctggaacggctgacgcgaggactgaatctt
gcccatctggcgcaggaaacggcgttcacagcggaagctatcggctttaacctcggactg
gcgcgcaactcggtcagtaaagatctcaatcagctctggaacgacggcctggcgattaaa
agccgcggacgcccggtattctttctgcatcgtcaggcgattgaaacgctgctggggcgc
aaactcgatgagtccgagcgcgaagtgcaaaccgttgccgacctgttgcctgttcaggaa
aaccaggcgacagaggatcccttttctggcctgattggttacgatcgcagcctgcgcgac
gcggtggaaaaaggccgcgcggcggtgctgtatccccacggactgcacgttctgctgacc
ggtccctccggcgtcggcaaaaccttttttgccgaactgatgcaccgtttcgcctgcgaa
cgcgcagtgggagcgtcgccgccgctggtttactttaactgcgcggaatacgcccataac
ccggagctgctttcttcgcacctgtttggtcatcgacagggggcatttaccggcgcaaat
gaaaataaacccggtctggtcgaacaggctgatggcggctatctcctgctcgatgaagtg
catcgtctgccgtatgaaggtcaggaaaagctgttttctattctcgacaaaggtgagtat
cgcccgctgggctcaagcgccgtggcgcggtcaatctcggttcgcctgatttgcgccacc
accgagccggtgagttcagcattgctgcgcactttccagcgacgtattcaggtatgtatc
gatttgcccggcatccgccagcgttcggtggaagagcaggttgaactgatcgttggcttc
ttacagcgtgagagccgcaaaatcgagcgtacgataagcatcgaccgtaccttgctgctc
tggctgttgaacaagccgctggaaggcaatattggtcagctcaagagcgatattcagttt
ctctgcgcccaggcctgggcttcgggaatgacggagcacagcgatacgctacagttggat
aaacgtctgaccgagatcccctttaacgccacgccggaacaacgtctgctggttggcgca
ctgttcgaaggcaaagagcatttaagcatcgatgcccgcacgctgcccgcgctgaaaaac
tcgctggcgaccggagccgaaattgaagagagcgatctcttctacagcttcctgacccgc
gaatatatcaacctgcgtaacagcaacgtgccgccagccgaaacgctggcaatcctcaaa
aacaagctcagttcgatatttgaatatggtctctatagccgcgacagcgtggcgcatcct
ccgcgctatggcgatcagattgaagagcgcgtcacgctgctgatcggctgcgttgaacag
gtgcttggttttacgctgccggaaaatctgattaacccgctgcgcaaacacttcctggcg
ctgattggctatgtgcagcgcggccttattccgcaactttattcttccagcctgatcctc
gatcgctgcaaagatgaatatgacaacgccacgctgctatgccgaaaaatcaatgaactg
ctgcatattcagtgtccggcgacggaagtggtctggctgtgcctgttcctcaaagagtgt
cgccattaccgccaacggattgacgccagtccggactgcggggtgattttgattgcccac
ggtgcgacgacggcgacaagtcaggcgcagtacgtgaatcgcgtgctggagcgcgaggtg
ttcagcgctatcgatatgcctttcgagcagtcggtgcatgacacgctggaagctttgaca
cagatgatccagacccggcaatatcgccgattgatcctgatggtggatattggctcgctg
gtccattttggcagcacgatcagtaagttattccagatagacgtactgctaatgcccaat
attacgctcaccagcctgctggaaatcgggctggatttaagctacgaaaccagcgacttg
ccgcagctggcggcgttgatgcagagcaaaaatattccctgtcagctctgtacgccgcag
caggaaaacagcggtaaagtgctggttatctcctgcatcaccgggatgggaacggcagaa
aaaatcaaaaaggtgctggaagagagcttcggtgagttgatgtcgcaggatacgcggatg
gtgatcctcgattacaacgaagtccgcagtctggagcgcgtgcagcaggcgattaacgcc
agtgaacgcctggcgggaatagtgggcactttccagccaggactgccggatattccgttt
atctcgcttgaggagctgttctctgaacaaggccccgagctggtactcagcctgctgacg
ccagatctctccagcagcgaacgccgtctggagatggagcgcagcgcgatgcgctttatc
agcgcgttgaccatggagagcatcattaaccatatttcggtgctcaacccgcagcgtatt
ctcaaagagatggaaggcgtgttgaatcatctgaccaccgcgctttcgctcaaaccgagc
cgtcaggtgacactgcgcttcctgatccactgctgctgtatggtcgagcgtatcgtgatt
aaccgcaaaccgttacagatggcgctggagaacaagccggatctggataatcgcgcgttt
agtgtcattaaatctgctttcctgccgatcgaagaggcctatgccattcgcttatcggac
gcggaatatttttatatctacgaactgctgtatagctaa
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