Citrobacter pasteurii: CUC49_19505
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Entry
CUC49_19505 CDS
T05874
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
cpar
Citrobacter pasteurii
Pathway
cpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUC49_19505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpar03019
]
CUC49_19505
Enzymes [BR:
cpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CUC49_19505
Messenger RNA biogenesis [BR:
cpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUC49_19505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CCDC138_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AYL63660
LinkDB
All DBs
Position
complement(3955893..3957161)
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQTTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPTTQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIVFANTKHRCEEIWGSLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRMTRPRPGNGPRRTGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccgaaggtg
atagaagcccttgaaaataaagggtttcataactgcacgcccattcaggctctcgcgctg
ccgcttacgctggcaggccgtgatgttgcagggcaggcgcaaaccggtaccggaaaaacg
atggcgttcctgacgtcaacgtttcattatcttctctctcatcccgcgattgacgatcgc
aaggtaaaccaaccgcgtgcgttaattatggcgccaacgcgtgagttagccgtgcagatc
cacgccgacgccgagccgctggcacagaccaccggtctgaaattaggcctggcttatggc
ggcgacggttacgacaaacagctgaaagtgctggaaagcggcgtcgatattcttatcggc
acgaccggtcgtcttatcgactacgcaaaacagaaccatatcaacctgggcgcgattcag
gtcgtggtgctggatgaagccgatcgtatgtacgatctgggctttattaaagatatccgt
tggctgttccgtcgtatgccgccaaccacccaacgtctgaacatgctgttttctgcaaca
ctgtcttatcgcgttcgcgaactggcgtttgaacaaatgaataacgccgagtacgttgaa
gtcgaaccggaacagaagacgggccaccgtattaaagaagaactcttctatccttccaac
gaagagaaaatgcgtttgctgcaaacgctgattgaagaagagtggccagatcgcgccatt
gtttttgctaacaccaaacatcgctgtgaagagatctggggcagtcttgctgctgacgga
catcgcgtaggcctgcttaccggtgacgtggcgcagaaaaaacgcctgcgtatccttgat
gagttcacccgtggcgatctcgatattctcgtcgcaaccgatgtcgcggcgcgtggcctg
cacatcccagccgtaacgcacgtgtttaactatgacctgccggatgactgtgaagattac
gtccaccgtattggtcgtacaggtcgtgcaggcgcaagtggtcattctattagcctggct
tgtgaagagtacgcgctgaatttacctgcaatcgagacctacattggccactcgattccg
gtcagcaagtacaacccggacgcgctaatgactgacctgccaaagccgctgcgcatgacg
cgcccacgcccaggcaatggcccgcgtcgtaccggtggtgctccgcgtaatcgtcgtcgt
tcaggttaa
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