Clostridium pasteurianum BC1: Clopa_0007
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Entry
Clopa_0007 CDS
T02645
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpas03032
]
Clopa_0007
03400 DNA repair and recombination proteins [BR:
cpas03400
]
Clopa_0007
Enzymes [BR:
cpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Clopa_0007
DNA replication proteins [BR:
cpas03032
]
Prokaryotic type
DNA Topoisomerases
Clopa_0007
DNA repair and recombination proteins [BR:
cpas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clopa_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF1869
TBCC_N
Motif
Other DBs
NCBI-ProteinID:
AGK95123
UniProt:
R4JXX2
LinkDB
All DBs
Position
6937..9405
Genome browser
AA seq
822 aa
AA seq
DB search
MNNEGKVLQVDISSEMKKCYIDYAMSVIIDRALPDVRDGLKPVHRRIIYSMHELGLTPEK
GYRKCARIVGDVLGKYHPHGDSSVYDALVRMAQDFNLRYPLVNGHGNFGSVDGDSAAAMR
YTEAKMSKIALEMIRDIGKNTVDFVPNFDGEEEEPSVIPSRFPNLLVNGSAGIAVGMATN
IPPHNLNEVIDAIFMLIDNNDVTILELMTKIKGPDFPTSGMIIGKSGIRSAYETGRGKVV
VRSKCEIEENNGKHRIIVTELPYQVNKAKLIENMADLVKDKRLNGISDLRDESDREGMRI
VIELKRDANPQVLLNQLYKHTKLQDTFGIIMLALVDGKPQYLNLKQMLQHYVIFQEEVIR
RRTQFELDKARARAHILEGLKIALDHIDEVINIIRSSKTVNEAEERLMDKFNLSEKQSEA
IVEMKLRRLTGLEREKIEEELAELMRTIEYLESVLADRNMILNIIKDELTEIKAKFGDER
KTLIESVENEIDIEDLIEDEDVVITLTHAGYIKRLPADTYTAQRRGGRGIQAMATKEDDF
VEHIFITSTHNNILFFSNQGKVYKLKAYEIHEAGRTAKGTNLINLLQLNQGEKIQAVITL
KEFKEDNYLIMATKKGVIKKTSLDQYAAIRKNGLNAINLREDDELIGVRLTNGDSEILMA
TKNGYAIRFNEKDARPLGRNTSGVRGISLREDDIVVGMEVVDIEQDVLVVSSNGFGKRTH
IAEYSVQKRGGKGVITYKVTEKTGELVGARMVKDADEMMIINSNDIVIRINVSDISTTSR
NAMGVTLMRSTDEEKVVAIAKIDTDVNENYEVEETNLDSNHE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaaggtaaggttttacaagtagatataagtagtgagatgaaaaaatgttat
atagattatgcaatgagtgttattattgaccgtgcattaccagatgtaagagatggtctt
aaaccagtgcatagaagaattatttattcaatgcatgaattaggtttaactccagaaaag
ggatatagaaaatgcgctagaatagttggagatgttcttggtaaataccatccacatggt
gattcatctgtatatgatgcattagttaggatggctcaagactttaacctaagatatccc
cttgtaaatggtcatggaaattttggatcagtagatggtgattcagcagctgctatgaga
tatacagaagcaaagatgagcaaaatagcacttgaaatgattagagatataggaaaaaat
acagtggatttcgtccctaattttgatggtgaagaagaagaaccatccgtaataccatca
agatttccaaatttattagttaatggatcagctggtattgcagtaggtatggcaactaat
atacctcctcataatttaaatgaggtcattgatgcaatatttatgcttatcgataacaat
gatgtaacaatattggagcttatgaccaaaataaaaggaccagattttcctacatcagga
atgataattggtaaatctggaataagaagtgcctatgaaacaggtaggggtaaggtggtt
gtaagatcaaaatgtgagattgaagaaaataatggtaagcatagaattatagtaactgaa
ttaccttatcaagttaataaagctaaacttattgaaaatatggctgatttggttaaggat
aagagattaaatggaatatcggatcttagagatgaatctgacagagagggtatgaggata
gttatagaactgaaaagggatgcaaatcctcaggttttattgaatcaactatataagcat
acaaaattacaggatacttttggaattataatgctagctttagtagatggaaagcctcaa
taccttaatttgaaacagatgttacagcattatgtaatatttcaggaagaggtaatacga
agaagaactcaatttgaattagataaagctagagctagagctcacatattagaaggtctt
aaaattgcacttgatcacattgatgaggttataaatattataagatcatcaaaaacggtt
aatgaagcagaagaaagacttatggataaatttaatctttcagaaaagcagtctgaagca
attgtagaaatgaagcttagaagacttactggtcttgaaagagaaaagatagaagaagaa
ttagcagaacttatgagaactattgagtatttagaaagtgtattagcagatagaaatatg
attttaaatataataaaagatgaacttacagaaataaaggctaagtttggtgatgaaaga
aaaactcttatagaaagtgttgaaaatgaaatagacatagaagaccttattgaggatgaa
gatgttgtaataacacttactcatgcaggatacataaaaagattgccagcagatacatat
acagcccaaagaagaggcggaagaggtatacaggcaatggctactaaagaagatgacttc
gtagaacatatatttataacatctactcataataatattttgttctttagcaatcaggga
aaagtctataaacttaaagcttatgagatacatgaagcaggaagaactgctaaggggaca
aatttaataaatcttctccaattaaatcaaggtgaaaaaattcaagctgtcataactttg
aaggaatttaaagaagataattatctaattatggctactaaaaagggagttataaagaaa
acttctcttgaccaatatgctgcaataagaaagaacgggcttaatgctataaatttaaga
gaagatgatgaacttattggagtaagacttacaaatggtgatagcgaaatattaatggca
actaagaatggttatgctattaggtttaatgaaaaagatgctaggccacttggaagaaat
acatctggagtaagaggaataagtcttagagaagatgatattgttgttggaatggaagtt
gtagacattgaacaggatgttcttgtagtaagttctaatgggtttggtaagagaacccat
atagctgagtattctgttcaaaaaagaggtggaaaaggtgtaataacctacaaagtaact
gaaaaaaccggagaacttgtaggtgccagaatggttaaagatgcagatgaaatgatgatt
attaatagtaatgatatagtaattagaataaatgtatcagatatatctaccactagtaga
aatgccatgggtgtaaccttaatgagaagtactgatgaagaaaaggtagtagcaatagcc
aagatagatacagatgtaaatgaaaattatgaggtagaagaaacaaatttggattctaat
catgaataa
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