KEGG   Clostridium pasteurianum BC1: Clopa_2063
Entry
Clopa_2063        CDS       T02645                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cpas  Clostridium pasteurianum BC1
Pathway
cpas03030  DNA replication
cpas03410  Base excision repair
cpas03420  Nucleotide excision repair
cpas03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Clopa_2063
   03410 Base excision repair
    Clopa_2063
   03420 Nucleotide excision repair
    Clopa_2063
   03440 Homologous recombination
    Clopa_2063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpas03032]
    Clopa_2063
   03400 DNA repair and recombination proteins [BR:cpas03400]
    Clopa_2063
Enzymes [BR:cpas01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Clopa_2063
DNA replication proteins [BR:cpas03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Clopa_2063
DNA repair and recombination proteins [BR:cpas03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Clopa_2063
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Clopa_2063
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_2 HHH_5
Other DBs
NCBI-ProteinID: AGK96949
UniProt: R4K8S7
LinkDB
Position
2078590..2081202
AA seq 870 aa
MERLLILDSNSLMNRAFYAIPALNNAEGLNTNAIYGFINMLFKMREELKPDYIVATFDKK
APTFRHKEYKDYKAGRKKMPPELAEQFPVVKELLEKLAINIFEIEGFEADDLIGTLASFS
RDRGIEVYIVTGDRDALQLAEDNVKIVINKKGMTEKEIYDKDRMLLDYGVTPKQFIDVKG
LMGDSSDNIPGVPGIGEKTALKLIKEYDSVENVLMNIENISGKKIKENLMEYSEQAVFSK
KLATIITNVPIEIDLESIKSKDNFDVKAVRKMFLKLEFKSLMNKIPDSEEEEAVIEVKAD
YEVLDTIEKLKKFTSSVKDAIYILFENENENVYSKSVIKKIYVNLQDKNYVIDYDKLFKA
DSEELKLVLKSVFENEEIDKIIHDAKIPYTILDKIGISLKGLIFDTKIAAYLIDPAKSEY
QLNGLIRDSLNIDIKDEDELLRVKEVQYLKAIYEDLSAKIKLLNMEELFYDVEEPLIEVL
SSMEGRGFKVDRVKLNELGEQFSEKIQQTQEEIYSISGEEFNISSPKQLGKILFEKLDLP
VIKKTKTGYSTNAEVLEKLRDKHPIIDKITYYRQLTKLYSTYVEGLKAVIDVDDKIHSSF
NQTVTTTGRLSSTEPNLQNIPIKHEMGREIRKVFIPDSSECVILSGDYSQIELRVLAHIA
DDENLINAFKHHSDIHTKTASEVFNVPIDQVTPLMRSNAKAVNFGIVYGIGDFSLAQDLK
ITKSKAKEYIDTYFARYPNVKKYLEDIVVKAKEELYVTTILNRRRYIPEIKARNKMVASF
GERLAMNTPIQGSAADIIKLAMVKVYEKLNKEKLKSTIILQVHDELILNVYKDELEKVKK
LVKDEMENAIELKVPLEVDINIGETWYEAK
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggaaagattgcttatattagatagcaatagtcttatgaacagagctttctatgcgata
cctgcccttaataatgcagagggattaaatacaaatgctatttatggttttataaatatg
ctctttaaaatgagagaggaattaaagcctgattacatagttgcaacttttgataaaaaa
gctcccacttttagacataaggagtacaaagattataaggctggaaggaagaaaatgccc
ccagagcttgcagaacaatttccagtagttaaggaacttcttgaaaagttggctataaac
atatttgaaattgaaggctttgaagcagacgatttaataggaaccctggcttccttttca
agagatcgtggaatagaagtttacatagttacaggagatagagatgcacttcaactggca
gaggataatgtaaagatagttataaataaaaagggtatgactgaaaaggaaatttatgat
aaggacagaatgcttctggactatggtgttactcctaagcagtttatagatgtaaaggga
cttatgggagacagctcggacaatattccaggagtgcctggcattggagaaaaaacggca
cttaagcttataaaagaatatgacagtgtggaaaatgttcttatgaacatagaaaatata
agcgggaaaaagattaaggaaaatctcatggagtatagtgaacaggcagtatttagtaaa
aaacttgcaactataataactaatgttccaatagaaatagatttagagtctataaaatca
aaagacaattttgatgtaaaagctgtaagaaaaatgtttttaaagcttgaattcaaaagt
ctcatgaataaaattcctgattcagaggaggaagaggctgtaattgaagtaaaagcagat
tatgaagttttggatactatagaaaaacttaaaaagtttacttcctcagtaaaagacgct
atatatatcctattcgaaaatgaaaatgagaatgtatactctaaaagtgttataaagaaa
atatatgtgaatctacaggataaaaactatgtaattgactatgataagctttttaaagct
gattcagaagaattgaaactagttctaaaatcggtttttgaaaatgaagaaatagacaaa
ataattcatgatgctaaaataccttatactatacttgataaaataggtatttcattaaag
gggttgatttttgacacaaaaatagcggcttatcttattgaccctgctaaaagtgaatac
caattaaatggcttaataagggatagcttaaatatagatataaaggatgaagatgagctc
cttagagtaaaagaagtacaatatctaaaagctatatatgaggatttaagtgcaaagatt
aagcttttaaatatggaagaattattttatgatgtggaagaacccttaatagaagtgctt
tcttctatggaaggtaggggctttaaggttgacagggtaaagcttaatgaattgggagag
caattcagtgaaaaaatacagcagactcaggaggaaatctatagtatttctggagaggag
tttaatataagctctccaaagcagcttggtaaaattctatttgaaaagcttgatttacct
gtgattaaaaagaccaaaacaggttattccaccaatgcagaggtgctggaaaagttaagg
gataagcatcctattatagataaaataacttactataggcagcttacaaaattgtattct
acttatgtggagggtttaaaagctgttattgatgtggatgataaaatacactccagcttt
aatcaaacagttacaactacaggaagactttcaagcacagaacctaaccttcagaatata
cctataaaacatgaaatggggagagagataagaaaggtatttatacctgacagctcagaa
tgtgtaattttgtctggagattattcgcaaatagaactaagggtgcttgctcatattgcc
gatgatgaaaatctaataaatgcctttaaacatcatagtgatatacatactaaaactgca
tcagaggtgtttaatgtgccaattgatcaggtaacgccacttatgagaagtaatgcaaag
gcagttaattttggtatagtttacggcatcggggattttagtcttgcacaagaccttaaa
ataaccaaaagtaaagcgaaagaatatatagatacctattttgcaagatatcctaatgta
aaaaaatatctggaagatattgttgttaaggcaaaggaagaactatatgttacaactata
ttaaatagaagaagatatattccagaaataaaggcaagaaataaaatggtagcttccttt
ggtgaaagactcgccatgaatacccctatacagggaagtgcagcagatataattaaactt
gcaatggtaaaggtatatgaaaaacttaacaaagaaaaattaaagagcactattatactt
caggttcatgatgaacttattttgaatgtatataaggatgaactagaaaaagtaaaaaaa
ctggttaaggatgaaatggaaaacgcaatagaattaaaggttccattagaagtagatata
aatataggggaaacctggtacgaagcaaaataa

DBGET integrated database retrieval system