Clostridium pasteurianum BC1: Clopa_2063
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Entry
Clopa_2063 CDS
T02645
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpas
Clostridium pasteurianum BC1
Pathway
cpas03030
DNA replication
cpas03410
Base excision repair
cpas03420
Nucleotide excision repair
cpas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Clopa_2063
03410 Base excision repair
Clopa_2063
03420 Nucleotide excision repair
Clopa_2063
03440 Homologous recombination
Clopa_2063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpas03032
]
Clopa_2063
03400 DNA repair and recombination proteins [BR:
cpas03400
]
Clopa_2063
Enzymes [BR:
cpas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Clopa_2063
DNA replication proteins [BR:
cpas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Clopa_2063
DNA repair and recombination proteins [BR:
cpas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Clopa_2063
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clopa_2063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGK96949
UniProt:
R4K8S7
LinkDB
All DBs
Position
2078590..2081202
Genome browser
AA seq
870 aa
AA seq
DB search
MERLLILDSNSLMNRAFYAIPALNNAEGLNTNAIYGFINMLFKMREELKPDYIVATFDKK
APTFRHKEYKDYKAGRKKMPPELAEQFPVVKELLEKLAINIFEIEGFEADDLIGTLASFS
RDRGIEVYIVTGDRDALQLAEDNVKIVINKKGMTEKEIYDKDRMLLDYGVTPKQFIDVKG
LMGDSSDNIPGVPGIGEKTALKLIKEYDSVENVLMNIENISGKKIKENLMEYSEQAVFSK
KLATIITNVPIEIDLESIKSKDNFDVKAVRKMFLKLEFKSLMNKIPDSEEEEAVIEVKAD
YEVLDTIEKLKKFTSSVKDAIYILFENENENVYSKSVIKKIYVNLQDKNYVIDYDKLFKA
DSEELKLVLKSVFENEEIDKIIHDAKIPYTILDKIGISLKGLIFDTKIAAYLIDPAKSEY
QLNGLIRDSLNIDIKDEDELLRVKEVQYLKAIYEDLSAKIKLLNMEELFYDVEEPLIEVL
SSMEGRGFKVDRVKLNELGEQFSEKIQQTQEEIYSISGEEFNISSPKQLGKILFEKLDLP
VIKKTKTGYSTNAEVLEKLRDKHPIIDKITYYRQLTKLYSTYVEGLKAVIDVDDKIHSSF
NQTVTTTGRLSSTEPNLQNIPIKHEMGREIRKVFIPDSSECVILSGDYSQIELRVLAHIA
DDENLINAFKHHSDIHTKTASEVFNVPIDQVTPLMRSNAKAVNFGIVYGIGDFSLAQDLK
ITKSKAKEYIDTYFARYPNVKKYLEDIVVKAKEELYVTTILNRRRYIPEIKARNKMVASF
GERLAMNTPIQGSAADIIKLAMVKVYEKLNKEKLKSTIILQVHDELILNVYKDELEKVKK
LVKDEMENAIELKVPLEVDINIGETWYEAK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattgcttatattagatagcaatagtcttatgaacagagctttctatgcgata
cctgcccttaataatgcagagggattaaatacaaatgctatttatggttttataaatatg
ctctttaaaatgagagaggaattaaagcctgattacatagttgcaacttttgataaaaaa
gctcccacttttagacataaggagtacaaagattataaggctggaaggaagaaaatgccc
ccagagcttgcagaacaatttccagtagttaaggaacttcttgaaaagttggctataaac
atatttgaaattgaaggctttgaagcagacgatttaataggaaccctggcttccttttca
agagatcgtggaatagaagtttacatagttacaggagatagagatgcacttcaactggca
gaggataatgtaaagatagttataaataaaaagggtatgactgaaaaggaaatttatgat
aaggacagaatgcttctggactatggtgttactcctaagcagtttatagatgtaaaggga
cttatgggagacagctcggacaatattccaggagtgcctggcattggagaaaaaacggca
cttaagcttataaaagaatatgacagtgtggaaaatgttcttatgaacatagaaaatata
agcgggaaaaagattaaggaaaatctcatggagtatagtgaacaggcagtatttagtaaa
aaacttgcaactataataactaatgttccaatagaaatagatttagagtctataaaatca
aaagacaattttgatgtaaaagctgtaagaaaaatgtttttaaagcttgaattcaaaagt
ctcatgaataaaattcctgattcagaggaggaagaggctgtaattgaagtaaaagcagat
tatgaagttttggatactatagaaaaacttaaaaagtttacttcctcagtaaaagacgct
atatatatcctattcgaaaatgaaaatgagaatgtatactctaaaagtgttataaagaaa
atatatgtgaatctacaggataaaaactatgtaattgactatgataagctttttaaagct
gattcagaagaattgaaactagttctaaaatcggtttttgaaaatgaagaaatagacaaa
ataattcatgatgctaaaataccttatactatacttgataaaataggtatttcattaaag
gggttgatttttgacacaaaaatagcggcttatcttattgaccctgctaaaagtgaatac
caattaaatggcttaataagggatagcttaaatatagatataaaggatgaagatgagctc
cttagagtaaaagaagtacaatatctaaaagctatatatgaggatttaagtgcaaagatt
aagcttttaaatatggaagaattattttatgatgtggaagaacccttaatagaagtgctt
tcttctatggaaggtaggggctttaaggttgacagggtaaagcttaatgaattgggagag
caattcagtgaaaaaatacagcagactcaggaggaaatctatagtatttctggagaggag
tttaatataagctctccaaagcagcttggtaaaattctatttgaaaagcttgatttacct
gtgattaaaaagaccaaaacaggttattccaccaatgcagaggtgctggaaaagttaagg
gataagcatcctattatagataaaataacttactataggcagcttacaaaattgtattct
acttatgtggagggtttaaaagctgttattgatgtggatgataaaatacactccagcttt
aatcaaacagttacaactacaggaagactttcaagcacagaacctaaccttcagaatata
cctataaaacatgaaatggggagagagataagaaaggtatttatacctgacagctcagaa
tgtgtaattttgtctggagattattcgcaaatagaactaagggtgcttgctcatattgcc
gatgatgaaaatctaataaatgcctttaaacatcatagtgatatacatactaaaactgca
tcagaggtgtttaatgtgccaattgatcaggtaacgccacttatgagaagtaatgcaaag
gcagttaattttggtatagtttacggcatcggggattttagtcttgcacaagaccttaaa
ataaccaaaagtaaagcgaaagaatatatagatacctattttgcaagatatcctaatgta
aaaaaatatctggaagatattgttgttaaggcaaaggaagaactatatgttacaactata
ttaaatagaagaagatatattccagaaataaaggcaagaaataaaatggtagcttccttt
ggtgaaagactcgccatgaatacccctatacagggaagtgcagcagatataattaaactt
gcaatggtaaaggtatatgaaaaacttaacaaagaaaaattaaagagcactattatactt
caggttcatgatgaacttattttgaatgtatataaggatgaactagaaaaagtaaaaaaa
ctggttaaggatgaaatggaaaacgcaatagaattaaaggttccattagaagtagatata
aatataggggaaacctggtacgaagcaaaataa
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