Clostridium pasteurianum BC1: Clopa_2133
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Entry
Clopa_2133 CDS
T02645
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpas03016
]
Clopa_2133
Enzymes [BR:
cpas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Clopa_2133
Transfer RNA biogenesis [BR:
cpas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clopa_2133
Prokaryotic type
Clopa_2133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF8055
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
AGK97012
UniProt:
R4K1R2
LinkDB
All DBs
Position
2143554..2144291
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AA seq
245 aa
AA seq
DB search
MRNLKMTIQYDGSKYKGWQKQKYGESTIQYKIENVLSKMTGEDIQIIGCGRTDAGVHAEN
YIANFHTNSELTVNTMLDYLYEFLPEDIVVKSIEDTAERFHARYNAKSKTYLYRINNNKF
RNVFTRKYAYHTDERLNLNEMRNAAEILIGTHDFQSFTNLKPNGKSTIKIINYINILEKE
DIIEIEVNGDGFLLNMVRIIVGTLLEVGKGKLKSMDIEKILDKRKREEYGPIAQAKGLYL
KNVQY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttaaaaatgacaattcagtatgacggaagcaagtataagggatggcaaaaa
caaaaatatggtgagtcaaccatacaatataaaatagaaaatgttttatctaaaatgact
ggtgaagatattcaaataataggttgtggaagaactgatgcaggagttcatgctgaaaat
tatatagcaaattttcatactaatagtgagcttactgtaaatactatgctagactattta
tatgaatttttacctgaagatatagtagtaaaatctattgaggatactgcagaaagattt
catgccagatataatgctaaatcaaaaacttatttatatagaataaataataataaattt
agaaatgtatttactagaaagtatgcttaccatactgatgagaggcttaatttaaatgaa
atgagaaatgcagcagagattttaattggaactcatgattttcagagttttactaattta
aagcctaatggtaaatccaccattaaaattataaattatataaacatattagaaaaagag
gatatcatagaaatagaagtaaatggagatggatttttacttaatatggttagaattatt
gtgggaactcttttggaggtgggtaaagggaagcttaaatccatggatatagaaaaaata
ttagataaaagaaaaagagaagaatacggtccaatagctcaggcaaaaggtttatatcta
aaaaatgttcaatattag
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