Clostridium pasteurianum BC1: Clopa_2233
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Entry
Clopa_2233 CDS
T02645
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpas03009
]
Clopa_2233
Enzymes [BR:
cpas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Clopa_2233
Ribosome biogenesis [BR:
cpas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Clopa_2233
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Cons_hypoth95
Methyltransf_25
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
Methyltransf_32
N6_N4_Mtase
Methyltrans_SAM
PCMT
Methyltransf_4
UPF0020
Methyltransf_11
FtsJ
Methyltransf_12
TRM
DOT1
Ubie_methyltran
SAM_MT
Motif
Other DBs
NCBI-ProteinID:
AGK97108
UniProt:
R4K3F2
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Position
2249127..2250494
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AA seq
455 aa
AA seq
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MRRHEEYEFDVVDVEFPGMGIAYSEDRKIYIKGAVPGQKVLGKVKKLKKEYGEAKLIKAL
NTIEGEVEPKCAHFGVCGGCTHQFINYDKQISLKEKQLLKLFKDAEIDDFIYEGIGRSPK
EFEYRNKMEFSFGDMEKGGEITLGMHMKNKAFGIINVHECALVHRDFRRILDTIVNYFRD
KESTYYKIMKREGYLRNLVIRRTEHTGEILVNLVTTSQGSFDKEEVVKLLLSLDLEANIV
GILHTTNDSFSDVVAADKIDILYGRDYIIEEVLGLKFKISPLSFFQTNTLGAEKLYSIVM
DFVGEADSKLIFDLYCGTGTIGQIAAAKNAKKVIGIELIEEAVKAANENAKLNNLDNCSF
IAGDVAKVIQELHDKPDVIILDPPRPGVHPKALDYVIKFDAKKIVYVSCNPKTLMVDLRK
LIESGYKVERVKGMDMFPMTGHLECVVGIRRKDTL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttgagaagacacgaagaatatgaatttgatgtagtagatgtagaattcccgggtatgggt
attgcatacagtgaagatagaaaaatatacataaaaggcgccgtcccaggccaaaaggtt
ctgggaaaggttaaaaaattaaaaaaagaatatggtgaagcaaaacttataaaagcactt
aataccattgaaggagaagtggagcctaaatgtgcccactttggagtctgtggaggctgt
acccaccaatttattaattatgataagcaaataagcctaaaagaaaaacaacttttgaaa
ttatttaaggatgcggaaatagatgatttcatctatgaaggtataggtagaagtccaaag
gaatttgaatacagaaataaaatggaattcagctttggagatatggaaaagggtggagag
attactttaggcatgcacatgaaaaataaagcctttggaattataaatgtgcatgaatgc
gctcttgttcatagagattttagaagaattttagatactattgtaaactattttagagat
aaagagtcaacttattataaaataatgaaaagagaaggatacctgagaaacctggtaatc
agaaggacagaacacacaggagaaattttagttaatctggtaaccacttctcaaggttcc
tttgataaagaagaagtggttaaattattgctgtccttggatctggaagctaatatagtt
ggaattcttcatactactaatgattctttttctgatgtggtagcagcagataaaatcgat
atactttacggaagagattatataattgaagaggtacttggtcttaaattcaaaatatca
ccactgtcattttttcaaactaataccctgggagctgaaaaactctatagcatagttatg
gactttgtaggtgaagctgactcaaaactaatctttgacctatactgcggtacaggtacc
attggccagattgcagcagctaaaaatgcaaaaaaagttataggtattgagctcatagaa
gaagcagtaaaagctgccaatgaaaatgcaaagttaaataatttagataactgcagcttc
attgcaggagatgtagctaaagtaatacaagagcttcatgataaaccggatgtaataata
ctggatccaccaagaccaggcgtacatccaaaggctttagattacgtaataaaatttgat
gccaagaaaatagtatatgtttcttgtaatcctaagacactaatggtggatcttagaaag
ctcatagagagcggatataaggtggagagagttaaggggatggatatgttcccgatgact
gggcatttggagtgtgtggtaggaatacgtcgcaaagataccttataa
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