KEGG   Clostridium pasteurianum BC1: Clopa_2321
Entry
Clopa_2321        CDS       T02645                                 
Name
(GenBank) Holliday junction DNA helicase, RuvB subunit
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cpas  Clostridium pasteurianum BC1
Pathway
cpas03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Clopa_2321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpas03400]
    Clopa_2321
Enzymes [BR:cpas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Clopa_2321
DNA repair and recombination proteins [BR:cpas03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Clopa_2321
    RecFOR pathway proteins
     Clopa_2321
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase RNA_helicase nSTAND3 ResIII Bac_DnaA AAA_16 AAA_18 AAA_2 TsaE AAA_14 AAA_24 bpMoxR AAA_17 Sigma54_activ_2 AAA_3 NB-ARC MCM AAA_28 IstB_IS21 ABC_tran DUF815 Parvo_NS1 Rad17 AAA_11 Resolvase NACHT
Other DBs
NCBI-ProteinID: AGK97185
UniProt: R4KC35
LinkDB
Position
2342400..2343449
AA seq 349 aa
MEERIVTSVNLGEDDDIEYSLRPQRLKEYIGQNKVKEKLNIFVKAAKNRKEALDHVLFYG
PPGLGKTTLANIIAREMGGNLKITSGPAIERAGDLAAILTSLSEFDVLFIDEIHRLNRSV
EEILYPAMEDYALDIIIGKGAAAKSIRLDLPKFTLIGATTRVGLLTSPLRDRFGVMCPME
FYEDEELKEIIIRSSSILKIDIEEAAALEVARRSRGTPRIANRLLKRVRDYSEVMGNGTI
DMQSSEKALELLEVDKEGFDRIDNKILEAIVDNFNGGPVGLETLAYFIGEELDTLDDVYE
PYLLQKGFIIRTPRGRVATDRTYKHLNRSRNLRNKDYKQCSVFKEAENK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggaggaaaggatagtaacttctgtaaatttaggtgaagatgatgatatagagtatagt
ttaagacctcagagactaaaagaatacatagggcagaataaagttaaggaaaaactcaat
atatttgtgaaagcagctaaaaatagaaaagaagctttagatcatgttttattttatggt
cctcctggacttgggaaaactactcttgcaaatatcatcgcaagagagatgggtggaaat
ctaaagataacctcaggaccagccatagaaagagctggagatttagcggctatacttacc
agtttgtctgaatttgatgtactatttattgacgaaattcacaggctaaatagaagtgta
gaggaaatattgtaccctgctatggaggattatgctttagacataattatagggaaggga
gcagcagcaaagtctataagattagatcttcccaaattcactttaattggagctactact
agagtaggccttttgacttcaccccttagagatagatttggagtaatgtgccccatggaa
ttttacgaagatgaagaacttaaagagataattataagatcttcatctatactgaaaata
gacatagaagaggcagcggcccttgaggtagcaagacgttctagaggtactccaagaatt
gccaataggcttttaaagagagttagagattattcagaggttatgggcaatggaactatt
gatatgcagtcgtcggaaaaagctttagaacttctggaagtagataaagagggctttgat
agaatagataataaaattctagaagctatagtggataattttaacggtggtccagtggga
cttgaaactttagcttatttcataggggaagaactggataccttagatgatgtatatgaa
ccatatttactccaaaagggatttattataagaactccaagaggaagagttgctacggat
agaacctataaacatttaaatagaagtagaaatttacgtaataaagattataagcagtgt
tctgtatttaaagaagctgaaaataaatag

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