Clostridium pasteurianum BC1: Clopa_2321
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Entry
Clopa_2321 CDS
T02645
Name
(GenBank) Holliday junction DNA helicase, RuvB subunit
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cpas
Clostridium pasteurianum BC1
Pathway
cpas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clopa_2321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpas03400
]
Clopa_2321
Enzymes [BR:
cpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clopa_2321
DNA repair and recombination proteins [BR:
cpas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clopa_2321
RecFOR pathway proteins
Clopa_2321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
RNA_helicase
nSTAND3
ResIII
Bac_DnaA
AAA_16
AAA_18
AAA_2
TsaE
AAA_14
AAA_24
bpMoxR
AAA_17
Sigma54_activ_2
AAA_3
NB-ARC
MCM
AAA_28
IstB_IS21
ABC_tran
DUF815
Parvo_NS1
Rad17
AAA_11
Resolvase
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGK97185
UniProt:
R4KC35
LinkDB
All DBs
Position
2342400..2343449
Genome browser
AA seq
349 aa
AA seq
DB search
MEERIVTSVNLGEDDDIEYSLRPQRLKEYIGQNKVKEKLNIFVKAAKNRKEALDHVLFYG
PPGLGKTTLANIIAREMGGNLKITSGPAIERAGDLAAILTSLSEFDVLFIDEIHRLNRSV
EEILYPAMEDYALDIIIGKGAAAKSIRLDLPKFTLIGATTRVGLLTSPLRDRFGVMCPME
FYEDEELKEIIIRSSSILKIDIEEAAALEVARRSRGTPRIANRLLKRVRDYSEVMGNGTI
DMQSSEKALELLEVDKEGFDRIDNKILEAIVDNFNGGPVGLETLAYFIGEELDTLDDVYE
PYLLQKGFIIRTPRGRVATDRTYKHLNRSRNLRNKDYKQCSVFKEAENK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaggatagtaacttctgtaaatttaggtgaagatgatgatatagagtatagt
ttaagacctcagagactaaaagaatacatagggcagaataaagttaaggaaaaactcaat
atatttgtgaaagcagctaaaaatagaaaagaagctttagatcatgttttattttatggt
cctcctggacttgggaaaactactcttgcaaatatcatcgcaagagagatgggtggaaat
ctaaagataacctcaggaccagccatagaaagagctggagatttagcggctatacttacc
agtttgtctgaatttgatgtactatttattgacgaaattcacaggctaaatagaagtgta
gaggaaatattgtaccctgctatggaggattatgctttagacataattatagggaaggga
gcagcagcaaagtctataagattagatcttcccaaattcactttaattggagctactact
agagtaggccttttgacttcaccccttagagatagatttggagtaatgtgccccatggaa
ttttacgaagatgaagaacttaaagagataattataagatcttcatctatactgaaaata
gacatagaagaggcagcggcccttgaggtagcaagacgttctagaggtactccaagaatt
gccaataggcttttaaagagagttagagattattcagaggttatgggcaatggaactatt
gatatgcagtcgtcggaaaaagctttagaacttctggaagtagataaagagggctttgat
agaatagataataaaattctagaagctatagtggataattttaacggtggtccagtggga
cttgaaactttagcttatttcataggggaagaactggataccttagatgatgtatatgaa
ccatatttactccaaaagggatttattataagaactccaagaggaagagttgctacggat
agaacctataaacatttaaatagaagtagaaatttacgtaataaagattataagcagtgt
tctgtatttaaagaagctgaaaataaatag
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