Clostridium pasteurianum BC1: Clopa_2340
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Entry
Clopa_2340 CDS
T02645
Name
(GenBank) helicase-exonuclease AddAB, AddB subunit
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpas03400
]
Clopa_2340
Enzymes [BR:
cpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clopa_2340
DNA repair and recombination proteins [BR:
cpas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Clopa_2340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF5621
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AGK97204
UniProt:
R4K9K1
LinkDB
All DBs
Position
2363815..2367279
Genome browser
AA seq
1154 aa
AA seq
DB search
MSLRFIYGRAGSGKSNFCIEDIKKKVEEDVEYPLIYLVPEQFSFQSEKSILNAIGEKSNL
KVRVISFKRMAFRVMNEVGGITHKHMDSAGKCMLISHIVDKILEELTVFRGAAAQQGFIN
TISDSISEFKRYSVTPELLLKTAEDMDKNINLKDKLLDLSKIYGEFEALLHKNYIDADDD
LTLLAEKLEESKIFNNAEIWVDEFSSFTPQQYKIIEKLLRKAKRVNVALTSDYVDGKNYG
TDIFEFTKGTEDRFLEIARNNNVKLDKPIVLTKKPFYRFKSSDEMAFLEKNLFVFPYEKY
KSKTSDIKLFRAQNTYSEIEGAARDIIRMCRDEGYRYKDIAVITRNLENYETIIASIFEE
HEIPYFIDEKRNIEGNLIVVLVTSVIEILTKNWSYEAVFRYLKTTLTNVTIEEVDILENY
VLASGIKGKKKWLEEEIWNYRPDSLFGRDEISLQEEELLNKVNSIRSIVIEPLKKLYKNT
RGKRNGEEICRTVFEFLTEIEVPEKVEALIEDFKENKRQTLANEYSQIWNIIIDLLDQTV
EVMGDTPLTLEEFVKIMSIGFREHKMGLIPPTVDQVLVGSVERLKSHDICILYLVGVNDG
VFPSVNNEEGILSDRDRELLKDRGVELAKNTRLAAFEEQFLVYTTLTIPGKYLRISYPMA
DYEGKSLRPSIIVSRLKTIYTNITEESDLVFEESDEDRLKLIDAKLPAFNHLIYVLRKRL
DENDDAMLWRDVYKWFSGYEYWREKCKRAFSGASYTNQTQLINSEKAKKLYGDNMHINVS
RMERYAQCPFAYYVQYGLNAKERKVFKLSYPDIGTFMHKIIDEFSEKVKEEQLSWDELDK
NWCEENISSIVEKNVKKSNSFILNSSPRYKYLTERLKRVLTKTALVITNHIKRSGFKPVG
YEIDFSEQGSYPPIIVRLPSGEEIKLIGRIDRIDMLVKEGETYIRIIDYKSGNKLFKLSD
VYYGLQVQLLLYLDAILTEEGKDLDKKPIPGAILYFKIDDPLVKSNKDLSDDELKKEIMK
RFKMKGLLIDDPEIIKEMDREMEGNSLIIPARINKDGSLGKSQAASRHQFELLRSHVKNV
IAKNCESMLSGDISIKPCKNKDSVPCDFCMYSSICAFDPSIDDNGYRYIYDKSDEEVWSL
ISKENDKEGENNGQ
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagatttatatatggaagagcaggaagtggtaaaagtaatttctgcatagag
gatataaagaaaaaagtagaagaagatgtagagtatccacttatatatctagtgccagag
cagttttcctttcaatcagaaaagagtattttgaatgccattggagaaaaatcaaattta
aaggttagagttatcagctttaaaagaatggcttttagggtgatgaatgaagttggtgga
attactcataagcacatggattctgctggcaaatgtatgcttatttcgcatatagtagat
aaaatactggaggagttaaccgtatttagaggagctgcagctcagcagggatttataaat
actatatcggattcaataagtgaatttaaaagatattcagttactccagaattgctttta
aaaactgcagaggacatggataaaaatataaatcttaaagataaacttttggatttaagt
aaaatatatggagaatttgaagctttactacataaaaattatatagatgctgatgatgac
ttaactttgcttgcggaaaagttagaagaatcaaaaatctttaataatgctgaaatatgg
gttgatgagttctctagcttcactccgcagcagtataaaataattgaaaaacttttaaga
aaggcaaaaagagtaaatgtagcattaaccagtgattatgtagatggtaaaaactatggt
acggatatctttgaattcactaagggaacggaagatagatttttagaaatagcaagaaat
aataatgttaaattagataaacccatagtacttaccaaaaagcctttttatagatttaag
agcagtgatgaaatggcatttttagaaaaaaatctatttgttttcccctacgaaaaatat
aaaagcaaaacttcagatataaaactttttagagcacaaaatacatattcagaaatagag
ggtgcagccagagacattataagaatgtgcagagatgaaggctatagatataaggatata
gctgttataacaagaaatctggaaaattatgaaactataatagcttcaatttttgaagaa
catgagataccctatttcatagatgaaaagagaaatattgaaggaaatctgatagttgta
cttgtaacatctgtaatagaaattctcactaaaaattggtcctatgaagctgtattcaga
tatttaaaaactacactgacaaatgtgacaattgaagaagtagatattcttgaaaattat
gttctagcctcaggaataaagggaaagaaaaaatggctggaggaagaaatttggaattat
aggccggattcactatttggaagagatgaaatatctcttcaggaagaggagcttttaaat
aaagtcaattctataagaagtattgttatagagcctctaaaaaagctttataaaaacact
agaggaaagagaaatggagaagaaatttgcagaactgtatttgaatttttaacggaaata
gaggttccggaaaaagtggaggcattaattgaagattttaaggaaaataaaagacagact
cttgccaatgaatacagtcaaatatggaatataataatagatttattagatcaaaccgtt
gaagtaatgggagatacacctcttactcttgaagaatttgttaaaattatgtccataggt
tttagggagcataaaatgggattgattcctcctacagtggatcaagtgctagttggtagt
gtggagaggctaaaaagtcatgatatctgcattctctatttagttggagtgaatgacgga
gtatttccatcggtgaataatgaagagggaatactaagcgatagggatagggaattgtta
aaggatagaggagtggagctggcaaagaatacaagattagctgcatttgaagagcaattt
ttagtatatactactctaacaattccaggcaaatatctcagaataagttatcctatggca
gattacgaaggtaaaagcttaagaccttctataatagtttccagattaaaaaccatatat
accaatataacagaggaaagtgatttggtttttgaagaaagtgatgaggatagactaaag
cttatagatgcaaagcttccagcatttaatcatcttatttatgtgcttagaaaaaggtta
gatgaaaatgatgatgctatgctttggagagatgtttataaatggtttagcggctatgaa
tactggcgagaaaagtgcaaaagagccttcagtggagcgtcctacacaaatcaaacccaa
ctcataaatagtgaaaaagctaaaaaactctatggagataatatgcatataaatgtatcc
agaatggagagatatgcccagtgtccttttgcttactatgtacaatatggattaaatgcc
aaagagagaaaggtatttaagctgagctatcctgatataggaacctttatgcataagata
atagatgagtttagtgaaaaggtaaaagaagaacagctttcctgggatgagcttgataaa
aattggtgtgaagaaaatataagcagtatagtggagaagaatgttaaaaagagtaatagc
tttattttgaatagctctccaaggtataaatatcttacagagaggcttaaaagagtactt
actaaaacagctcttgtaataacaaatcatataaagagaagtggatttaaacctgtaggt
tatgaaatagattttagtgaacaggggagttatccaccaataattgtacgattaccttct
ggtgaagagataaagctcatagggcgaatagatagaatcgatatgttggttaaagaaggg
gagacctatataagaataatagattataaatctggaaataagctttttaaactttctgat
gtgtattatggactacaggtgcagcttttactttatcttgatgccatacttacagaagag
ggaaaagatctagataaaaaacctattccaggggccatattgtattttaaaatagatgat
cctctggtaaaaagtaataaggatttaagtgatgatgaacttaaaaaggaaataatgaaa
agatttaaaatgaaaggcttattaatagatgatcctgaaataattaaagagatggataga
gaaatggaaggtaattcactgattattcctgcaagaataaataaagatggttccttagga
aaatctcaggcagcttcaaggcatcaatttgaacttttgagaagtcatgtaaagaatgta
atagctaaaaattgtgaaagcatgttaagtggagatataagtattaaaccttgtaaaaat
aaggactctgtaccttgcgatttttgtatgtattcctccatatgtgcctttgatccatct
atagatgataacggctatagatacatatacgataaaagtgatgaggaagtttggagcctg
attagtaaggagaatgataaggaaggtgaaaacaatgggcaataa
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