Clostridium pasteurianum BC1: Clopa_2477
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Entry
Clopa_2477 CDS
T02645
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpas03036
]
Clopa_2477
Chromosome and associated proteins [BR:
cpas03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Clopa_2477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
GAS
AAA_27
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGK97340
UniProt:
R4KCJ5
LinkDB
All DBs
Position
2514157..2517714
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AA seq
1185 aa
AA seq
DB search
MFLKAVEIRGFKSFADKIELDFQKGVTAVVGPNGSGKSNISDAIRWVLGEQSIKTLRGGK
MEDVIFSGTQFRKSVGLAQVTLTLDNSDNMIPVDYDEVTIGRRLYRSGESEYYINNTKCR
LKDVQEMFMDTGIGKEGYSIIGQGKIEAVLSGKSEERRGLLEEAAGIVKFKTRKEEAERK
LESTEENLVRINDILGTYEERLQPLEKESEKAKAFVRLSQELNEKEINLLVNSAERLKIK
IDNTLNNTKNLDYEINKLNVERDGAKTNFKKYNEDLLELENLHEARRKEYYERKSQHQNI
ISENNLIKEKIQNLKQLKIKYTGELEEIAEKINISISENKKYTEEYILLKNKVKEHNENA
ASLVKILEIAQQEIDEDGKLLKKYKSEEFDTLGSISDFKNFIILIKKDMENHDLNMNQIK
TACEGYLNSIKINKNTKDALEKEIVKIKKKIEDYENNIGENKREITRINIILNEDEKEFS
SLNTEINKSEANRNMLNSLNEQYEGYNKSVKNLMSHIKKGYIHQENKKCFVFGEIIKVDK
RFETAIEIALGGSISNIITEDEILAKKLINYLKDNNLGRATFLPLNILQNKNLVIDSNIK
NASGYIGIASKLVEYDKELSAAVEHVLGRTVIAEHMDSALEISKKSNFSFRVVTLAGEIV
NPGGALTGGSIYNKGFNIIGRKREVEELNFKIDKMKEKLHKLSIKNKENNTSINSLDDMN
LNLRDYIHFENIEITKIQGKINAIDIESEKLNKNHRISINEISMLSDKKEEAAKELFTKE
KEINSLEHKKRQLSELEEKLEEKLKRENEKILAVKDNLTSIKVKEAKLEENIVNKKRDVD
RLNGEIKYAENKSMDLKTQVNNFQIDSAKFEDTLKLNSKTLEEIKKFLAATDNVFQEDEI
TKLKIKQKLQSYNEKIEQLNIIVDKKDEEKHKVQLNLTRIETENEALIERLNDEFKLTYA
EALEYKREINDIIVYKNNIQELKNNIAALGIVNVGSIEEYKSVKEKYNFMSSQREDLVKS
KEEIINVINEMTDRMKTVFSENFEKIRRNFTETFRELFKGGNADLILSGEDVLSSNIEIN
VEPPGKKLQNINLMSGGEKGLSAIALLFAILKMKPTPFCILDEIEAALDDANVARYAEFL
RKFSEKIQFIVITHRKGTMEASNVLYGVTMEEKGVSKVVSVDLAI
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgttcttaaaagccgttgaaatacgagggtttaaatcatttgcagataaaatagaattg
gattttcaaaaaggtgtaacagcagtagtaggacctaatggaagtggtaagagtaatatt
tctgacgcaattagatgggttttaggtgagcaaagcataaagactctaagaggggggaaa
atggaagatgtaatattttcaggaactcaatttagaaaatccgtagggcttgctcaggtt
acacttactttagacaattcagacaatatgattcctgtggattatgatgaggtaactata
ggcagaagactatatcgttctggtgaaagtgaatactatattaataatactaaatgtaga
cttaaagatgttcaggaaatgtttatggatactggtataggaaaagaagggtattcaata
attgggcagggtaagatagaagcggtacttagcggaaaatctgaggagagacgtgggcta
ttagaagaggccgcaggtattgtcaaatttaaaactagaaaggaagaagcggaaaggaag
cttgaaagtacggaggaaaatctcgtaagaataaatgatatactagggacttatgaagaa
aggcttcagcctctagaaaaagaaagtgaaaaagcaaaggcttttgttagattatctcag
gaactcaatgaaaaagagataaatctattagttaattccgcagaaaggcttaagataaaa
attgataatactttgaataatactaaaaatttagattatgaaattaataaattaaatgtg
gaaagagacggcgcaaagaccaatttcaaaaaatacaatgaagatctacttgaacttgaa
aatttgcatgaagctcggagaaaggaatactatgaaaggaagtctcagcatcaaaatata
atttcagagaataatttaataaaggaaaaaatacaaaatttaaaacaattaaaaattaag
tatacaggagaattagaggaaatagcagaaaaaattaatatatccatatctgaaaataaa
aagtatacggaagaatatattttattgaaaaataaagtaaaagaacataatgaaaatgct
gccagtctagtaaaaatattagaaattgcacagcaggaaatagatgaagatggaaaactt
ttaaagaaatataagagtgaggaatttgatactttaggcagtatatcagattttaaaaac
tttataattttaataaaaaaagatatggaaaatcatgatttaaatatgaatcaaattaaa
actgcctgtgaaggttatttaaactccattaagattaataaaaacacaaaagatgcactt
gaaaaggaaatagtgaaaataaagaaaaagatagaagactatgaaaataatataggagaa
aataaaagagaaataactagaattaatataattttaaatgaagatgaaaaagaatttagt
agcttaaatactgaaattaataaatcagaagcaaatagaaatatgcttaatagtttaaat
gaacaatatgaaggatataataaatcagtaaaaaatcttatgtctcatataaaaaaagga
tatattcatcaagaaaataaaaagtgttttgtatttggagaaattataaaagtagataaa
agatttgaaacagccatagagattgctttaggaggatccatttcgaacataattacagag
gatgaaattttggcgaaaaagcttataaattatttgaaagataacaatctgggtagagct
acatttttgccattgaatattttacagaataaaaatttagttatagatagtaatataaaa
aatgcttctggctacattggcattgcaagtaaattggtagaatatgataaagaactttca
gcagcagttgaacatgttctgggaagaacagttattgcagaacatatggatagtgctttg
gaaatatcaaaaaaatctaattttagtttcagggttgtaactcttgctggggaaattgta
aaccctggaggagctcttactggtggaagtatttataataaaggctttaatataattggc
agaaaaagagaagtagaggaattaaactttaaaattgataaaatgaaagaaaaacttcat
aagctatctataaaaaacaaagaaaataatactagtataaattctttagatgatatgaat
ttaaatttgagagattatattcattttgaaaatatagagattactaaaattcagggtaaa
attaatgcaattgatatagaaagtgaaaaattaaataaaaatcataggatttctattaat
gaaattagcatgcttagtgataaaaaggaggaggcagctaaagaattattcactaaagaa
aaggaaattaatagtttggaacataagaaaagacagctttcagagttagaagaaaaatta
gaagaaaaactaaaaagggaaaatgagaaaatcttagctgtaaaggataatttaacttct
ataaaagtaaaagaggcaaaattagaggagaacattgtaaataaaaaaagggacgttgac
aggttaaatggggaaataaagtatgctgaaaataaaagtatggatttaaaaactcaagta
aataattttcaaatagatagtgctaagtttgaagatacattaaaattaaatagcaaaact
ttagaagaaataaaaaaatttttagcagctacagataatgtttttcaagaagatgaaatt
acaaaattaaaaataaagcagaaattacagagttataatgagaaaattgagcagctaaat
ataatagttgataaaaaggatgaggaaaaacataaagtacaactgaatttaactagaata
gaaactgaaaacgaagctttaattgaaagattgaatgatgaatttaagctcacctatgca
gaagcattagagtataaaagagaaataaatgatataatagtatataaaaacaacattcag
gaattgaaaaataatatagcagctttgggcattgtaaatgtaggatccattgaagaatat
aaatctgttaaagaaaagtataattttatgtcaagtcaaagagaagacttagtaaaatct
aaagaagaaataataaatgttataaatgaaatgacggatagaatgaaaacagtatttagt
gaaaattttgaaaaaattagaagaaattttacagaaacctttagagaactttttaaggga
ggaaatgctgatcttatactttcgggagaagatgtattgtcttcaaatatagaaattaat
gtagaacctccaggtaaaaaacttcaaaatataaatttaatgtctggtggggaaaaaggt
ctttctgccattgctctcctttttgcaattttaaagatgaagcctactccattttgcata
ctagatgagattgaggcagccttagatgatgcaaatgtagctagatatgctgagttttta
agaaagttttcagaaaaaatacagtttatagttattacacatagaaaaggtactatggag
gcaagcaatgttttgtatggcgttactatggaggaaaaaggagtgtcaaaagtggtgtct
gttgatttagccatttaa
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