Clostridium pasteurianum BC1: Clopa_2575
Help
Entry
Clopa_2575 CDS
T02645
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpas03032
]
Clopa_2575
03400 DNA repair and recombination proteins [BR:
cpas03400
]
Clopa_2575
Enzymes [BR:
cpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Clopa_2575
DNA replication proteins [BR:
cpas03032
]
Prokaryotic type
DNA Topoisomerases
Clopa_2575
DNA repair and recombination proteins [BR:
cpas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clopa_2575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_3
DmmA-like_C
Toprim_4
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AGK97435
UniProt:
R4KCU1
LinkDB
All DBs
Position
2587612..2589696
Genome browser
AA seq
694 aa
AA seq
DB search
MGQNLVIVESPAKAKTIGKYLGNNFVVEASMGHVRDLPKSTLGVDVEDNYNPRYITIRGK
GELLDKLRKRAKKSDKIFLATDPDREGEAISWHLAKVLKIDEDKKCRIVFNEITKNAIKS
AIKKPRRVDLNLVDAQQARRVLDRLVGYKISPILWRKVKWGLSAGRVQSVALKMICDREK
AINDFKPEEYWSIECLLSKNEKYKPFLVKLHSANNKKISIGTKEVADNIIKELEKEKFIV
DNIKKSTKNKNPLAPFTTSTLQQDAYKRLNFSTKRTMSIAQILYEGIEIKGHGTVGLITY
MRTDSVRISEEAQNNAKEYIKSIFGEEFVPKTTRIFKGKKNIQDAHEAIRPTYINITPEE
ARSSLKDDQFKLYSLIWNRFMASQMASCIVDTVTLIIKNGIYSFRATGSSIKFPGFMKVY
NYTSDEDDDDIKLPALNANDILYKKEIKGNQHFTQPPAKFSEASLVKTLEENGIGRPSTY
APIISTLLDRKYIEREKKTLNPTELGNIVNNIVSEYFKEIIDIEFTAEMEHKLDNVEEGK
ENWNNVVDQFYKPLEVSIDIAEKEVSKITIEDEVTDIKCDKCGKFMVIKHGRFGDFLACP
GYPECKNTKPIVQELDVACPKCGGKILVRKSKKGRKFFGCSNYPDCDFVSWFEPTNEKCN
KCGSYMVKKYNKTKGNYLECSNQECKNKKFNETT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaatttagttattgtagaatcaccagctaaggcaaaaactataggtaagtat
ttaggaaataattttgttgtagaagcatcaatggggcatgttagagatttaccaaaaagt
actttaggtgttgatgtagaggacaattacaatcctaggtatataacaataagaggaaaa
ggtgaacttttagataaacttagaaaaagggcaaaaaagagcgataaaatatttctggct
actgaccctgatagagagggagaagccatatcttggcatttggcaaaagttttaaaaata
gatgaagataaaaaatgtagaatagtctttaatgaaattactaaaaatgctataaagtct
gcaataaaaaaaccgagaagggtagacttaaatcttgtggatgcacagcaagcacgtaga
gtactggatcgattagtaggttataagattagtcctatactttggcgaaaggtaaagtgg
gggttaagtgctggaagagttcaatctgtggcattaaaaatgatctgtgatcgtgaaaag
gccataaatgattttaaacctgaagaatactggtccatagagtgcttattaagcaaaaat
gaaaagtataaacctttcttggtaaaacttcattcagcaaataataaaaagatttctata
ggaactaaagaagtagcagataatattattaaagaattggaaaaagaaaaatttatagtt
gataatattaaaaaatctactaagaataaaaatccactggcaccatttactacaagtaca
ttacagcaggatgcatataagagattaaatttctcaactaaaagaactatgtccatagct
caaattttatacgaagggattgaaataaagggccatggaactgttggtttaattacttac
atgagaacagattctgtgagaatatctgaagaggcgcaaaataatgccaaagaatatatt
aagtctatttttggagaagaatttgtgcctaaaactactagaatttttaaggggaaaaaa
aatatacaggatgcccatgaagcaataagacctacatatataaatattaccccagaagag
gccaggtcaagtcttaaagatgatcagtttaaattgtacagcttaatttggaacagattt
atggcaagtcaaatggcatcctgcattgtggatacagttactttaatcataaaaaacgga
atatattcctttagagccacaggttcaagtattaaatttcctggatttatgaaagtttac
aattatacttctgatgaagatgatgatgatattaagcttccagcattaaatgcaaatgat
atattatataaaaaagaaattaaaggaaatcaacattttactcaaccaccggcaaaattt
tctgaggcctctttagtaaaaactcttgaagaaaatggtattggtagaccaagtacctat
gctccaattatttctacacttcttgacagaaaatacattgaaagagagaagaagacatta
aatccaacagaacttggaaatatagtaaataatattgtcagtgaatactttaaagagatt
attgatattgagtttactgctgaaatggaacacaaattggataatgtagaagaaggtaaa
gaaaattggaataatgtagtagaccaattttataagcctttggaagtttccatagatatt
gcagaaaaagaagtatcaaaaattactattgaagacgaagttacagatatcaaatgtgat
aagtgtggcaaatttatggtcattaagcatggacgctttggagattttttagcatgccca
gggtatcctgaatgtaaaaatacaaaaccaatagtgcaggaacttgatgtagcttgtcca
aagtgtggtggaaaaatattagtaagaaaaagtaaaaagggaagaaaattttttggatgc
agtaattatcctgattgtgattttgtcagttggtttgaaccaactaatgagaaatgtaat
aaatgtggttcctacatggtaaaaaaatataacaaaacaaagggaaattatcttgagtgc
tcaaatcaagaatgcaaaaataaaaaatttaatgaaacaacttaa
DBGET
integrated database retrieval system
