Clostridium pasteurianum BC1: Clopa_2602
Help
Entry
Clopa_2602 CDS
T02645
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpas03009
]
Clopa_2602
Enzymes [BR:
cpas01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Clopa_2602
Ribosome biogenesis [BR:
cpas03009
]
Prokaryotic type
ribosomal protein modification factors
Clopa_2602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AGK97460
UniProt:
R4KCW1
LinkDB
All DBs
Position
2615528..2616868
Genome browser
AA seq
446 aa
AA seq
DB search
MNKLNFGLISLGCDKNRIDSETILGDIKDNYEIVNDPKKADIILVNTCGFIEASKQESID
TILEMAEYKNKYNCKMLIATGCLTQRYGNELLNLMPELDLILGVNDYNKLNQAIGNFFNE
GGKKQSLCNYSDENINGGKRIVTTGSFSAYVRISEGCNNSCSYCIIPKIRGKYRSRTMED
IIEECIELSEQGIKEIILVAQDTTRYGLDIYNKKMLPELLRKISEIKSIQWIRILYCYPE
EITDELVAEISTNDKVCKYIDIPIQHISNNILTKMKRHTKKEEITKSILNLKSTIKNICL
RTSIIVGFPGETDEDFEELKDFIKYIKFDKLGVFMYSREEETEAFYMPNQIDEAVKKQRQ
EELMLIQQQISKDINKTKIGRIYNVIIEGKNNNNFWYGRNYEIAPEIDGEIFFKCDRILN
VGNFINVKIIDSLEYDLIGVVCDESC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaactaaattttggactgataagtttaggctgtgataaaaatagaattgattca
gagactatacttggggatattaaagacaattatgaaatagtaaatgaccctaaaaaagct
gatataattttggtaaatacttgtggatttattgaggcctcaaagcaagaatctatagat
actattttggaaatggcagaatataaaaataaatataactgcaaaatgcttatagccact
ggatgtttaacacaaagatatggaaatgaattattaaatttaatgcctgaattagattta
attcttggggtaaatgattataataaacttaatcaggctattggaaatttttttaatgag
ggtggaaaaaaacaaagtttatgtaattatagtgatgaaaatataaatgggggaaaaaga
attgtaactactggatcctttagtgcttatgtaagaatatctgaaggctgcaataattcc
tgctcctattgcataattcctaaaattagaggaaaatatagaagcagaacaatggaagat
attattgaggaatgtattgaactgagtgaacagggtattaaagaaataatacttgtagcc
caggatactacaagatatggattggatatttacaataaaaaaatgcttcctgagcttctt
agaaaaattagtgaaattaaatctattcaatggataagaatactctattgttatcctgaa
gaaataacagatgaattagtagctgaaatttctactaatgacaaagtatgtaagtatata
gatataccaatacagcatattagcaataatatacttacaaaaatgaaaagacatacaaaa
aaagaagagataactaaatcaatattaaatttaaaaagtacaataaaaaatatatgcctc
agaacatcaataattgtaggctttcctggcgaaacagatgaggattttgaggaactaaag
gattttattaaatatattaaatttgataaattgggagttttcatgtattcaagagaagag
gaaacagaagctttttatatgccaaatcaaatagatgaagctgtaaagaaacagaggcag
gaagaattgatgctaattcaacagcaaatatcaaaagatataaataaaacaaaaattggt
agaatatataatgttattatagaaggaaaaaataataataacttttggtatggaagaaat
tatgaaatagctccggaaatagatggtgaaatttttttcaaatgtgatagaatattaaat
gtaggtaattttattaacgtaaaaattatagatagtctagaatatgatttaataggggtt
gtatgtgatgaatcttgctaa
DBGET
integrated database retrieval system
