KEGG   Clostridium pasteurianum BC1: Clopa_2918
Entry
Clopa_2918        CDS       T02645                                 
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cpas  Clostridium pasteurianum BC1
Pathway
cpas02020  Two-component system
cpas02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cpas00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Clopa_2918
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Clopa_2918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpas03021]
    Clopa_2918
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cpas02035]
    Clopa_2918
Transcription machinery [BR:cpas03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Clopa_2918
Bacterial motility proteins [BR:cpas02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Clopa_2918
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 Sigma70_ECF HTH_23 GerE capSnatchArena
Other DBs
NCBI-ProteinID: AGK97756
UniProt: R4K7R3
LinkDB
Position
complement(2890828..2891553)
AA seq 241 aa
MAIPEISDTREEIVKEYIPLVKYIASRVIVGKSKYIEYEDLIGYGMIGLMDALNKFDKSK
GMKFSTYASIRIKGAMIDEIRKNSPISKGAMDRLNKYNQTVENLQKKLLRYPTDMEIAKA
FGGTIADIAEVENYINYMSITSLESLIFSEDDDMPIITTIEDKNSPSPERALEEKEKIEY
LSKALDILNEKDKTVLSLYYYEGLTLKEIGSILSVSESRVCQLHSRAIVHLREALKKLKY
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atggctataccagaaatttctgatactagagaggaaatagttaaggaatatattccattg
gtaaaatatatagcatctagagttatagtaggtaaaagtaaatatatagaatatgaggat
ttaataggttatggtatgattggattaatggatgctcttaacaaatttgataagagtaag
ggtatgaaattttcgacctatgcttctattagaataaagggagctatgatagatgaaatt
aggaagaatagtcctatatcaaaaggtgctatggataggcttaacaaatataatcaaaca
gtagaaaacttgcaaaaaaaacttttaaggtatcctacagatatggaaatagcaaaggcc
tttggaggaactatagcagatatagcagaggtggaaaattacataaattatatgtctata
acttctttggaaagtttgattttttcagaagatgatgatatgcctataattacaactatt
gaggataaaaacagtccaagcccagaaagggctttagaagaaaaagaaaaaattgaatat
ttatccaaggcactagatatcttaaacgaaaaagataaaactgtactttccctatactat
tatgaaggtttaactttgaaagaaataggcagcattttatctgtatcagaatctagagtt
tgccaactgcactcaagagctattgtgcatcttagagaagctttaaaaaagctaaaatat
gaatag

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