Clostridium pasteurianum BC1: Clopa_3110
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Entry
Clopa_3110 CDS
T02645
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
cpas
Clostridium pasteurianum BC1
Pathway
cpas01501
beta-Lactam resistance
cpas02010
ABC transporters
cpas02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Clopa_3110
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clopa_3110
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Clopa_3110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpas02000
]
Clopa_3110
Transporters [BR:
cpas02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Clopa_3110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
ResIII
TniB
DO-GTPase2
DUF87
AAA_22
SWI2_SNF2
RNA_helicase
NACHT
AAA_16
SLFN-g3_helicase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AGK97925
UniProt:
R4KE81
LinkDB
All DBs
Position
complement(3103403..3104410)
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AA seq
335 aa
AA seq
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MEKLLQINNIHTSFHTHVGEVKAVRGVSLDLYKGEAIGIVGESGSGKSITMMSLMRLLED
NGEIKEGEILFEGKDLTKLSEKEMEKIRGNEISMIFQDPMTSLNPVFTIGNQLIEPLIKH
KKLSKAEATKKAIEMLTLVGIPSPEKRIKQYPHEFSGGMRQRAMIAMSLVCGPKLLIADE
PTTALDVTIQAQILELMKDLKEKLNMSIILITHDLGVVADVCNRINVMYGGTVVESGTSR
DIFYNPKHPYTWGLLRSIPNPKEDVKERLKPIEGNPPDLLNPPKGCPFAQRCEYAMKICI
DNRPENFKIDEGHYSACWLNHPDAPKVTPDTGRNK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttactccaaattaataatatacacacttcatttcatactcatgtgggagaa
gttaaggcggtaagaggtgtaagtcttgatttatataaaggagaagccattggaatagtt
ggtgaatccggcagtggaaaaagtataactatgatgtcgctaatgcgtttacttgaagat
aacggagagataaaagagggagaaatactgtttgaaggcaaggatttaactaagctttca
gaaaaggaaatggagaagattagaggaaatgaaataagcatgatattccaggatccaatg
acctctttgaatcctgtatttaccatagggaatcagcttatagaaccacttatcaagcat
aaaaaattaagtaaagctgaggcaactaagaaggctatagagatgctaacgctagtaggt
ataccaagcccggaaaagcgaataaaacaatatcctcatgaattttctggtggtatgaga
caaagagctatgattgccatgtctcttgtatgtggccctaagcttttaatagcagatgaa
ccaactactgcactggacgttaccatacaggcacaaatacttgaacttatgaaggatctt
aaggaaaaattaaatatgtctattattctcataactcacgatttgggagttgtggctgac
gtatgtaatagaataaatgttatgtacggtggtactgttgtagaaagtggaactagtaga
gatatattttataatcctaaacatccttatacctgggggcttttaaggagtatacctaat
cctaaagaggatgtaaaagagagattaaagcctatagaaggtaatccaccagatttattg
aatccacctaagggctgtccttttgctcaaaggtgtgaatatgccatgaaaatttgtata
gacaatagaccagaaaattttaaaatagatgaaggtcattattctgcatgttggttaaat
catcctgatgcacctaaggttacgcctgatacagggaggaataaataa
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