Clostridium pasteurianum BC1: Clopa_3560
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Entry
Clopa_3560 CDS
T02645
Name
(GenBank) arabinose efflux permease family protein
KO
K08164
MFS transporter, DHA1 family, putative efflux transporter
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpas02000
]
Clopa_3560
Transporters [BR:
cpas02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
Clopa_3560
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_4
Motif
Other DBs
NCBI-ProteinID:
AGK98345
UniProt:
R4KFF8
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All DBs
Position
complement(3552812..3554026)
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AA seq
404 aa
AA seq
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MSNTANNTMNNTWKIYMLALISFLIGTTQLVIEGTLDKVAASVGVSIAMAGQLITAFSLA
NAIGTPIVIVAIARMKKPKQLLLSLAILLLGIVSTLALPGFGFLMVSRVVLGVATGLFVV
TAYGIAAKLAPAGREVGAMSNITMGYSASLVFGVPIGRIVATAYGWKSIFWGVGILSLLA
IFIIVRTIPDMEGEAPVSLNKRLAFLKKPKIAITLGVTFFMFIGYSVINTYITPFLADLM
PGIGQEMSVILLALGIASLIGSKLGGFLADRIGTVRTLVGGMAIQVLALVLLSLVHRSVI
VTITLLILWMIAVWTFGPTQNFNLVSLAPESSGIMLSLNSSFVQLGFAAGAGIGGITVGA
LSIMAITWIAAASIAFATIVAAVSSGIASSFLKHVAMKFHNMAA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacagcgaataatacaatgaataatacttggaaaatttacatgctggccctt
atcagcttcttgattggcacgacacaattagtcatcgagggcactctggataaagtcgct
gcttccgtcggtgtgtctatagcgatggcaggacagcttattaccgcattctcgcttgcc
aatgcaatcggcacgcctattgtgatagtagcgatagcgaggatgaaaaagcccaagcaa
ctgctattgtctctcgccatcctattactcggcatcgtttcgacactcgcccttccaggc
tttggcttcttgatggtctctcgcgtcgtactcggagtcgcaacgggcttattcgtcgtc
accgcctatggcatagctgctaagttggctcctgccggacgtgaggtcggagcaatgtcc
aacatcacaatgggctatagcgcctcactcgtctttggtgttcctattggccgtattgtc
gctacggcgtatggttggaagtctatcttttggggcgtaggcatcttaagccttctggca
atcttcattatcgtacggacgattcctgacatggaaggtgaagcaccagtctctctcaat
aagcgactcgcattcttgaagaagccgaagatcgctatcacactcggcgtgacattcttc
atgtttatcggttattcggtaatcaatacgtatatcactcctttcctggccgacctcatg
ccaggaattggacaggaaatgagcgtcattctcctagccttgggcattgcgagcttgatc
ggctccaagcttggcggtttcttggcggatcggattggcactgtccgcacgctcgtcgga
ggcatggctatccaagtcctcgccttggtgctgttgtctttagtccatagatcggtaatt
gtcaccatcacgttgctcattctatggatgatagctgtatggacgttcgggccgacccag
aactttaacttagtctcgcttgctccggaatcctctggtatcatgcttagtctgaacagt
tcctttgtacagctcggctttgctgcaggcgccggcatcggaggaatcaccgtaggagcc
ttgtcgataatggcgatcacttggatcgctgcagcctccatcgcgttcgctaccatcgtc
gcggccgtttcctccggaattgccagctccttcctcaagcacgtagcaatgaagttccac
aatatggctgcctaa
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