Clostridium pasteurianum BC1: Clopa_3798
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Entry
Clopa_3798 CDS
T02645
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpas03021
]
Clopa_3798
Transcription machinery [BR:
cpas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clopa_3798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Med14
Histone_HNS_N
DUF6468
Motif
Other DBs
NCBI-ProteinID:
AGK98566
UniProt:
R4KA56
LinkDB
All DBs
Position
complement(3818577..3819278)
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AA seq
233 aa
AA seq
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MFFKKSLEERVEKAKKSQEELNTLIEEYKPFIASTLQKKTGKYLKYGYDDELTIGMMAFK
EAIDSYDKSKGKFLNFAKQVIILRGIDYYRKNEKLKNTVYLQGTYDIENEDISIGILNRA
MEEYEHKNVNEMRKLEILEYKKELKEWGIELLELVQASPKQQKLKKTYKDIAQFIVQDKD
MLNKLISIKRLPLKEIENSMLIQRKKLERGRIYIIALVIAAIGDYELIREYIE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgttttttaagaaatctcttgaggaacgagtagaaaaggcaaaaaaaagtcaagaagaa
ttaaacacgttaatcgaggaatataagccgtttatagcaagtactttgcagaaaaagaca
ggaaaatatttaaagtatggatatgatgacgagcttacaattggtatgatggcttttaag
gaagctatagattcatacgataaaagcaaagggaaatttttaaactttgctaaacaggtt
attattcttagaggtatagattattacagaaagaatgaaaaattaaaaaatacagtttat
ttgcaaggaacttatgatatagaaaatgaagatataagcattggaatactgaatagagcg
atggaagaatatgaacataaaaatgtaaatgaaatgagaaaattggaaattttagaatat
aaaaaggaattaaaagaatggggaattgaacttttagaactagtgcaagcttctccaaaa
caacaaaagcttaaaaaaacctataaggatattgcacaatttattgtacaggataaagat
atgcttaacaagttaataagtataaaaagattgcctttaaaagaaatagaaaacagtatg
cttatccagcgtaaaaaacttgaaagaggaagaatatatattattgcattagtgattgcg
gcaataggtgactatgaactgatacgagaatacatcgaatga
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