Clostridium pasteurianum BC1: Clopa_3938
Help
Entry
Clopa_3938 CDS
T02645
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease component
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cpas
Clostridium pasteurianum BC1
Pathway
cpas02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Clopa_3938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpas02000
]
Clopa_3938
Transporters [BR:
cpas02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Clopa_3938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_16
AAA_7
MMR_HSR1
AAA_30
AAA
AAA_29
AAA_23
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AGK98687
UniProt:
R4K669
LinkDB
All DBs
Position
complement(3966676..3968457)
Genome browser
AA seq
593 aa
AA seq
DB search
MKRNKFDVDEDLEIKFSLVHLKRLLKYITVYKTKFLITISIMILAAFVNLLGPYLIKDAL
DVKIPGKDLKGLIFISIVYLLTLVINNICMKYKIRIMTFVGQNAILNMRKDLFVHLQKLP
FQYYDSRPHGKILVRAVNYVNGLSDLLSNGIVNMITDLFTLIFIIMFMLYINIKLTVTCL
IGIPVIILVMFLLKNIQRKAWQLLSNKLSNLNAYTHESICGMRVTQCFTREDENLSIFRK
LNDDYRKHWIKSVKIQFLMSPVVDNISVIIIAAVYIIGIASIDKDVTIGVLIAFIGYIGR
FWTPISNLAGAYNNIINAMSYIERIFETIDEKVIVEDMSNAYELPVIRGNVEFKNVTFAY
DESKTILNNISFSVSHGQSIALVGPTGAGKSSIINLISRFYDIQQGEILIDGINIKEVTL
NSLRRQMGVMLQDPFIFSGTIKENIRYGRLDDSDEEIVAAAKSVRAHDFIKELKDGYETI
VNENGSRFSAGQKQLISFARALLADPKILILDEATSSIDTKTEALLQEGLQKLLKGRTSF
IIAHRLSTIKNSDKIMYIDKGQIIESGNHDELINKQGEYYKLYSSQYELFKAI
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaataaatttgatgtagatgaagatttggaaataaaatttagtttagtacat
cttaaaagacttttaaaatatataacagtatataagactaaatttttaataactatttca
ataatgatacttgcagcttttgtaaatttattaggcccttatctaataaaagatgctctg
gatgtaaagataccaggaaaagatttaaagggattgatatttatatcaatagtatacctt
ttaactttggtaataaataatatttgcatgaaatataaaattcggattatgacctttgtg
gggcaaaatgcaatacttaatatgagaaaagatttatttgtacatcttcaaaaattacct
tttcaatattatgatagcagaccccatggaaagattttggtaagagcagttaattatgta
aatggactcagtgatttactttctaatggtattgtgaatatgattactgacctgtttact
ttaatatttattattatgtttatgctttatataaatattaagcttacagttacatgttta
ataggtattccagttatcatattagtaatgtttttattaaagaatatacagagaaaagcc
tggcagcttctgagcaataaactgtcaaatctaaatgcatacactcatgaaagcatatgt
ggaatgagagttactcaatgctttacaagagaagatgaaaacttaagtatttttagaaaa
ttaaatgatgattacagaaaacactggattaaatcagttaaaattcaatttttgatgagt
cctgtagtagataatatatctgtaattattatagctgctgtatatataattggaatagct
tctatagataaagatgttactattggtgttctaatagcatttataggatatataggaaga
ttttggacaccgatttctaatctagctggtgcttataataatattataaatgccatgtcc
tatatagaaagaatttttgaaactatagatgaaaaagttattgtagaagatatgtctaat
gcatatgaattaccagtaataaggggaaatgtagagtttaaaaatgtaacatttgcctac
gacgaaagtaaaactatacttaataatataagtttttccgtttctcatggacaaagtatt
gctttagttggtcctacgggggctgggaaaagcagtattattaatttaataagtaggttc
tatgatattcagcagggagaaatattaattgatggtataaatataaaagaagttactctt
aattctctaagaagacaaatgggagttatgcttcaggatccatttattttttctggaacc
ataaaagaaaatataagatatggaaggttagatgattctgatgaagaaatagtagctgct
gcaaaatcagtaagggcacacgattttattaaggaactaaaagatggttacgaaacaata
gtaaatgaaaatggttctagattttccgcaggacaaaagcagcttatatcttttgcaaga
gctttacttgccgatccaaaaatattaattttagacgaagcaacttccagtattgatact
aaaacagaagcattacttcaagagggattgcaaaaattgcttaaaggtagaacgtctttt
ataatagcccatagactgtccactataaaaaattctgataagattatgtatatagacaag
gggcaaatcatagaaagtggcaatcatgatgaacttataaataaacagggtgaatactat
aaactttacagttctcaatatgaattatttaaagctatttaa
DBGET
integrated database retrieval system
