Clostridium pasteurianum BC1: Clopa_3984
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Entry
Clopa_3984 CDS
T02645
Name
(GenBank) dipeptidase, putative
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
cpas
Clostridium pasteurianum BC1
Pathway
cpas00300
Lysine biosynthesis
cpas01100
Metabolic pathways
cpas01120
Microbial metabolism in diverse environments
cpas01230
Biosynthesis of amino acids
Module
cpas_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Clopa_3984
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpas01002
]
Clopa_3984
Enzymes [BR:
cpas01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Clopa_3984
Peptidases and inhibitors [BR:
cpas01002
]
Metallo peptidases
Family M20
Clopa_3984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AGK98729
UniProt:
R4KDW5
LinkDB
All DBs
Position
complement(4018633..4020024)
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AA seq
463 aa
AA seq
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MNINDSIDNLKDQLIKAVQEVVRVKSVEEKPQSGMPFGEGPANALETALEIARNLGFKIV
NLDNYVGYAEYGESDEYVAALGHLDVVPEGDGWKYPPYSAEIHEGKIYGRGTTDDKGPII
SALFALKAIVDAKLPLSKKVRIIFGTNEESGSKELKYYLDREKPPIAGFTPDAEYPIING
EKGITIFDFVKDLNTKPQGDFIIKYIKGGQKANMVPDYCEAGIKADLRSVLIESCEQFSE
RTGYDLKIEEKEDMVIVKSYGVSAHGSLPQLGKNAIMQLFAFLGELDLGSSDIGKFINFF
NRYVGFEVNGESFGVGLSDDVSGKLSFNLGVADINEDKARLTLNVRYPVTKTYEDLMDPL
EDRIKDTGIRVENMQHQEPLYFPENHPLIKTLQKVYKEQTGDEPKLLSIGGGTYAKEMPN
IVAFGPIFPGKPDLDHQANEYIEIEDLIINAKIYAHTIYELAK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaatgatagtatagataaccttaaagatcagcttattaaagcagttcaagaa
gttgtacgagtaaagagtgtagaagaaaaacctcaatcaggaatgccttttggagaaggt
ccggcaaatgcactggaaactgctcttgaaattgcaagaaatttgggctttaaaatagtt
aatttagacaattatgtaggatatgcggaatatggagagagtgatgaatatgttgcagca
cttggtcatcttgatgtagtgccagaaggcgatggatggaaataccctccttattcagca
gaaatacacgaagggaaaatttatggaagaggaactactgatgataagggtcctattatt
tctgcattgtttgcacttaaggccatagtagatgccaaattacctctttccaaaaaagta
agaattattttcggaactaatgaagaatcagggagtaaggaacttaaatattatttggat
agagaaaagcctccaatagctggttttacaccagatgcagaatatccaattataaatggg
gaaaagggaataactatatttgactttgttaaggatttaaatacaaagccacaaggagat
ttcattataaagtatattaaaggtgggcaaaaggcaaatatggttcctgattattgtgaa
gcaggaatcaaggctgatttaaggagtgttctaattgaaagctgtgagcagttttcagaa
aggactggatatgatttgaagatagaggaaaaagaggatatggtgatagtaaaatcctat
ggagtttctgctcatggaagtttaccgcagcttggtaaaaatgctattatgcagcttttt
gcatttctaggtgagcttgatcttggaagttcagacataggaaaatttataaatttcttt
aatagatatgtgggctttgaggtcaatggtgaatcttttggtgtagggctttcagacgat
gtgtcaggtaaactttcctttaatttgggtgtggctgacataaatgaagataaggctaga
ttgacactaaatgtgagatatcctgttactaaaacttatgaagatttaatggatccatta
gaggatagaataaaggatacaggaataagagttgaaaatatgcagcatcaagagcctcta
tatttcccggaaaatcatccactaattaaaactctacaaaaggtttacaaagagcagact
ggtgatgaacctaagctattatctattggaggagggacttatgccaaggaaatgcctaat
atagtagcctttggacctatatttccaggtaagcccgatttagatcatcaagcaaatgag
tatattgaaattgaagatttaataatcaatgccaaaatatatgcacatactatttatgag
ttagctaaataa
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