Clostridium pasteurianum BC1: Clopa_4483
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Entry
Clopa_4483 CDS
T02645
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpas
Clostridium pasteurianum BC1
Pathway
cpas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Clopa_4483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpas03021
]
Clopa_4483
03400 DNA repair and recombination proteins [BR:
cpas03400
]
Clopa_4483
Enzymes [BR:
cpas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Clopa_4483
Transcription machinery [BR:
cpas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Clopa_4483
DNA repair and recombination proteins [BR:
cpas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Clopa_4483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AGK99193
UniProt:
R4K9F6
LinkDB
All DBs
Position
complement(4561354..4562301)
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECIESNEDGSYGKFIIEPLERGYGITLGNSLRRILLSSLPGVAANSIKIEG
VLHEFSTIKGVKEDVTEIILNIKCLALKMSGDGPKIIYIDAEGAGEVTAADIKTDGDVEI
VNKDLHIATLDGDAKLYMEIEVNRGRGYVTQNRNKREDMPIGTIPVDSIYTPVKRVNFSV
ENTRVGQITDYDKLTIEIWTNGTIRPEEAISLSAKILIEHFKLFMTLTDHADDVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERSMEDMMKVRNLGKKSLEEVE
QKLEALELSLKQSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaagccaaaaattgaatgtatagaatctaatgaggatggttcttat
ggtaagtttattattgaacctttagaaagaggttatggaattactttaggaaattccctt
agaagaattctactctcatcattaccaggagttgctgccaattccataaaaattgaaggt
gtacttcatgaattttcaactataaaaggtgttaaggaagatgtaacagaaatcatatta
aacattaaatgtttagctttgaaaatgagcggtgatggtcctaaaatcatttatattgat
gctgaaggagctggagaggttactgctgctgatataaaaactgatggagatgtagaaatt
gttaataaagatttacatatagctacacttgatggtgatgcgaagttatatatggaaatt
gaagttaacagaggaagaggctatgttactcagaatagaaataaaagagaagatatgcct
ataggaactattccagtagattcaatatatacaccagtaaaaagagttaactttagtgtt
gaaaacacaagagttggccagataacggactatgataagttgactattgagatatggact
aatggaactataagaccggaagaagctataagcttatccgctaaaattcttatcgaacat
tttaaattatttatgactttaacagatcatgcagatgacgttgaaattatggtagaaaaa
gaagaagataagaaagaaaaagtacttgaaatgactatagaagaattagatctttcagta
aggagttataactgtttaaagagagcaggtattaatacagttcaggaattaacagagaga
tccatggaagatatgatgaaagtaagaaatttaggtaaaaaatcacttgaagaagttgaa
caaaaacttgaagctttggaactatcattaaagcaaagtgaagagtaa
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