Clostridium pasteurianum BC1: Clopa_4633
Help
Entry
Clopa_4633 CDS
T02645
Name
(GenBank) ABC-type uncharacterized transport system, periplasmic component
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cpas
Clostridium pasteurianum BC1
Pathway
cpas02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clopa_4633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpas02000
]
Clopa_4633
Transporters [BR:
cpas02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Clopa_4633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
NDUF_C2
Motif
Other DBs
NCBI-ProteinID:
AGK99324
UniProt:
R4KFJ4
LinkDB
All DBs
Position
complement(4694355..4695521)
Genome browser
AA seq
388 aa
AA seq
DB search
MLKKKILSLAITAAVSVSFLATGCGASNQNSSQSSSIKPATINLYSGGSENVRTTWEQVI
KAFKAKYPQITVNLQFIASGPSAQSAVDKEIASEKAGETETDMDIVEVSDSDIAKLFKAA
GKDSVVTLSKDKIPNMKDIKFQSSVGQDKALVFRGTTVVLAYNSDKVKDVPKTDKELYDW
IKSHPGRFAYNDPTTGGSGDAFLITSVYNSLPQEAITSDDPKWEQQWDTGFNLLKELHPY
MYKASGKVQYPVKNQGTLDLLANGQVDMIPAWADMALDQLSKGTLPKSIKITQISPSFTG
GVQSLVIPAKSKNKEAAEIFLNFAASSDGQKIFMDSMKALPIIDTSKLPKESVDMLAGLK
IKDFRVNSLGDLSKDIHKRWQDQIATLK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaaaaaaattttatcacttgcaattacagcagcggtttcagtttcattttta
gctaccggttgtggagcttctaaccaaaattctagtcaaagttcctcaattaaaccagct
acaattaatctttattccggtggatcggaaaacgttaggacaacttgggaacaggtaata
aaagcctttaaggcaaaatatcctcagattactgttaatcttcaatttatagcttcaggt
ccaagtgcacaatctgctgtagacaaagaaatagcttctgaaaaagctggtgagacagaa
acagatatggacattgtagaagtttcagatagtgatattgccaaattattcaaggcagca
ggaaaagattccgttgttaccttgagcaaagataaaattccaaatatgaaagatataaaa
tttcaatcatctgtgggacaggataaagctcttgtctttagaggtacaacagttgtacta
gcatataattcagataaagtaaaagatgttccaaaaacagataaagaattatatgattgg
ataaagtcacatcctggaagatttgcttataatgacccaacaacaggaggttcaggggat
gcatttttaattacttcagtatataatagtttacctcaggaggctatcacttcagatgat
ccaaagtgggaacaacaatgggatacaggctttaacttattaaaggaactgcatccatat
atgtataaagcttctggaaaggttcaatatccagtaaaaaatcaaggtactttagatttg
ttagcaaacggacaagtagatatgataccagcttgggcagatatggcacttgatcaatta
tctaaaggtactttaccaaaatcaattaaaattactcaaattagcccttcctttactggc
ggcgtgcaatcattggtaattccagctaagagtaaaaataaggaagcagcagaaatattc
ttgaattttgcagcttcaagtgatggccaaaagatatttatggattcaatgaaggcttta
cctataattgacacttcaaagcttccaaaggaatctgttgatatgcttgctggtttaaaa
attaaggacttcagagtaaattctttaggtgatttaagtaaagatatacacaaacgttgg
caggatcaaatcgctactttaaagtaa
DBGET
integrated database retrieval system
