Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c00200
Help
Entry
CLPA_c00200 CDS
T03753
Symbol
serS1
Name
(GenBank) serine--tRNA ligase 1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CLPA_c00200 (serS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpat01007
]
CLPA_c00200 (serS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpat03016
]
CLPA_c00200 (serS1)
Enzymes [BR:
cpat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CLPA_c00200 (serS1)
Amino acid related enzymes [BR:
cpat01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CLPA_c00200 (serS1)
Transfer RNA biogenesis [BR:
cpat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CLPA_c00200 (serS1)
Prokaryotic type
CLPA_c00200 (serS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CCDC113_CCDC96_CC
DASH_Dad2
Motif
Other DBs
NCBI-ProteinID:
AJA50143
UniProt:
A0A0H3J5C5
LinkDB
All DBs
Position
23991..25271
Genome browser
AA seq
426 aa
AA seq
DB search
MLDLKRIRTNPEEIKKLLTNRGEDFDLADIDKVVELDEKRRKILVEVENFKGKRNKESAE
IAKLKRAGENADNLVADMKKLSEEIKTLDAEVVKVDEELEYIMMRIPNIPHESVPEGKSD
EDNVEIRKWGEPRKFDFELKAHWDIGKDLDILDFERAGKVAGSRFTFYKGLGARLERSII
SYFLDTHVEKHGYTEILPPYMVNRNSMTGTGQLPKFEEDAFKVENNGFFLIPTAEVPVTN
LFRDETLKGEELPIKFAAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFAKPEQSYEE
LEKLTADAEEVLQILGLPYRVIRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNFED
FQSRRANIRYKESPKDKPQFVHTLNGSGVAVGRTVAAVLENYQNEDGTVTIPEILRTYMG
GRDLIK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaagaataagaacaaatccagaagaaataaaaaaattacttaccaat
agaggtgaagattttgatttagctgatattgataaagtagttgaattagatgaaaaaaga
agaaaaattcttgtagaggttgaaaattttaagggtaagagaaataaagagtcagcagaa
atagcaaagttaaaaagagctggtgagaatgctgataatcttgtggctgatatgaaaaag
ctttctgaagaaataaaaactttagatgcagaagtagttaaagttgatgaagaattagaa
tatataatgatgagaattcctaacatacctcatgagagtgtaccagaaggcaagtctgat
gaggataatgttgaaataagaaaatggggagagccaagaaagtttgattttgaattaaaa
gctcattgggatatcggtaaagaccttgatatattagattttgaaagagctggaaaagta
gctggttcaagatttacattttataaaggtcttggtgcaagacttgaaagatctattata
agttactttttagatacacacgttgaaaagcatgggtatactgaaatattaccaccatat
atggtaaatagaaatagtatgactggaactggtcagttacctaaatttgaagaagatgca
tttaaggttgaaaataatggatttttcttaattcctacagcagaagtgccagttactaat
ttatttagagatgaaacattaaaaggggaagagcttcctataaaatttgctgcctatagt
gcttgttttagatcagaagcaggttctgcgggaagagatactagagggcttgttcgtcaa
catcagtttaataaggttgaattagttaagtttgcaaaaccagaacaatcttatgaagaa
cttgaaaaacttacagcagatgcagaagaggttttacaaattttaggccttccttatagg
gtgattagaatatgtaaaggtgatttaggatttactgctgcattaaagtatgatattgaa
gtttggatgccaagctacaacagatatgtagaaatatcaagctgtagtaattttgaagat
tttcaatcaagacgtgctaatataagatataaagaaagtcctaaagataaacctcaattt
gttcatacacttaatggttctggagttgcagttggtagaactgtagcggcagtccttgaa
aattatcaaaatgaggatggcactgtaactatacctgaaatattaagaacttatatgggt
ggtagggatttaataaaatag
DBGET
integrated database retrieval system
