Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c01330
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Entry
CLPA_c01330 CDS
T03753
Name
(GenBank) tRNA nucleotidyltransferase/poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLPA_c01330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpat03019
]
CLPA_c01330
Enzymes [BR:
cpat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CLPA_c01330
Messenger RNA biogenesis [BR:
cpat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLPA_c01330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJA50221
UniProt:
A0A0H3J2U2
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All DBs
Position
135742..136944
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AA seq
400 aa
AA seq
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MINLIRKMEEIFKSLNGEAYLVNGYVIEKLIKPSANIKKIDIMYKGNIDDLFKLSKENLN
YNIRLYNNEKMLIIEDNRNTLKIIELINKDIEEYLKDADYTMNAISVKLIDNKIIDPYQG
RNHIKRRIIQEVNDKSIENHPLAILKGINYYIKYGMHFSIDTELHIRQQRKRLRDNYKSK
LLKELMNIINADKTGVAFNVLDQYSILENLLPYINELKSIGKCKYHIEDVFTHMNTSYEV
LKDIQYGKIKLKGLDIDIFNRNIDGYNLIDFLALTVFLHDIGKYKTYKKDNIKVSFINHD
VVGKDIMKDVCKELYIPKAAEDIICNVIEAHMYPLKLFNIKDDIQEFNKELNLFINRYGE
YYIYITIASYCDIIATTTYYDPDNKAEEYKSFIEKLLKIK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatttaataagaaaaatggaagaaatttttaagagtttaaatggagaggcctat
ttggtaaatggttatgtaatagaaaagcttataaagcccagtgctaatataaaaaaaata
gacattatgtataaaggtaatatagatgatctttttaaattatctaaagaaaatttaaat
tataatattagattatataataatgaaaaaatgttaataatagaagataataggaataca
ttgaaaataattgagttaattaataaagatatagaagaatatcttaaagatgcagattat
actatgaatgcaatatcagtaaagcttatagataataaaattattgatccctatcaagga
agaaatcatataaaaagaagaattatacaagaagttaatgataaaagtattgaaaatcat
ccattggccatattaaagggaattaattattatattaaatacggaatgcattttagtatt
gatactgaattacatataagacaacagaggaaaaggttaagagataattataaaagtaaa
ttattaaaggaacttatgaatatcataaatgcagataaaactggtgtagcatttaatgta
ttggatcaatattctattttagaaaatttgttaccttatattaatgaacttaagagcatt
ggaaagtgtaaatatcatatagaagatgtttttacccatatgaatacttcttatgaagtg
ttaaaagatattcagtatggaaaaataaagttaaaaggattagatatagatatatttaat
aggaatatagatggatataatttgatagattttttagctctaactgtttttttacatgat
attggaaaatataaaacttataaaaaagataatattaaagtaagttttattaatcatgat
gtagttggtaaggatataatgaaagatgtttgtaaagagttgtatattcctaaagctgca
gaagatataatttgcaatgtaatagaggcgcatatgtatcctttaaaattatttaacata
aaagatgatatacaagaatttaataaagagttaaatctatttattaatagatatggagaa
tattatatatatataactatagcctcttattgtgatattatagctactactacctattat
gatccagataataaagcagaagaatataaaagttttattgagaaacttttaaaaatcaaa
taa
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