Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c09560
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Entry
CLPA_c09560 CDS
T03753
Symbol
mutS1
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLPA_c09560 (mutS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpat03400
]
CLPA_c09560 (mutS1)
DNA repair and recombination proteins [BR:
cpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CLPA_c09560 (mutS1)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJA51044
UniProt:
A0A0H3IZS9
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Position
complement(1028660..1030549)
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AA seq
629 aa
AA seq
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MDNTTLEKLHYYELKEIVKGYCVSGLGKALLDKLEPSTNIKVVSRRLDETSEGRALLDAS
YHIPFDGIFNVIPLIEKMEKGASLAPEDLSMIENFLRGCRKLKLFMKDKEGYAPTLSAYS
LNITDLSYIEEEINISISGNRIDSSASKELKKIRKHIDICEGQIKGKLEKFLKNPTNKDY
IQEFFISQRNGKYTIPIKAAFKNQVQGEVIETSLKGSTVFIEPNVIAKYTSELATLKIEE
AMEEYKILATLTEMLYERIKEIKMNIDVISEYDMIWAKARYSSDIEGIKPKLNEYGYIKI
IKGSYPLIKNGVPLDFEIGKDYRSLIITGPNAGGKTIVLKTLGMLTLATQSGFHIKAKEG
TEISIFNNIFVDIGDNQSIENALSTFSSHVKNLAYIIKESTKSTLLLFDEIGSGTEPNEG
AALAISILEELYHKGCITVSTTHYGEIKNFSEQHPDFENAAMEFRKDTLEPLYKLNIGKT
GDSNALYISKKMGISDNIIERARRYIENKDYNYELVRDSKVNKKKDIEEDKGEIYEFVIG
DKVLWVDKNESAIVYKEKDIYNNITILFNKEFVNVNYTRLKLEIKASELYPEGYDLNQLF
VNFKERKLERDIERGSKKALKKLKKNHLK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggataatacaacattagaaaaactacattactatgaattaaaggaaatagtaaaaggt
tattgtgtaagcggcttaggcaaagccttattagataaattagaaccaagtacaaatata
aaagtagtaagtagaagattggatgagacctctgaaggaagagcacttttagatgcttct
tatcatataccttttgatggaatatttaatgtgatcccgcttatagaaaaaatggaaaaa
ggtgcatcattagctccagaggatttaagcatgatagaaaattttttaagaggttgcaga
aagcttaaattatttatgaaggataaggaaggttatgcccctactttgagtgcatatagc
ttaaatataacagatttaagttatatagaagaggaaataaatatatcaatatcaggaaat
agaatagattcaagtgcttcaaaggaacttaaaaaaataagaaaacatattgacatatgt
gaaggtcaaataaagggaaaacttgaaaaattcctaaaaaatcctacaaataaagattat
atacaagaattttttataagccaaagaaatggaaaatataccatacctataaaagctgcc
tttaaaaatcaagtgcaaggtgaagttattgaaacctcgctaaagggtagtaccgtattt
atagaaccaaatgtaatagccaaatatacttctgagctagcaaccctaaaaattgaagag
gctatggaagaatataaaatattagctactttaacggagatgttatatgaaagaataaaa
gaaattaaaatgaatattgatgtaatatctgagtatgatatgatttgggcaaaagcaagg
tacagtagtgatatagaaggaataaagcctaaactaaatgagtatggttatataaaaata
attaaaggcagctatcctttaattaaaaatggagtaccattagatttcgaaataggaaaa
gattatagatcactaataatcacgggacctaatgccggaggaaaaacaatagtattaaaa
accttaggaatgttaactcttgcaactcaatcaggatttcatataaaggctaaagaaggt
acagaaatatctatatttaacaatatatttgtagatataggagataatcaaagtatcgaa
aatgccttaagtactttttcatctcatgtgaaaaatctagcatatataataaaagaaagt
actaaatcaacattattattgtttgatgaaattggtagtggaacagagccaaatgaaggt
gcagctttagccatatctattttagaggaattgtaccataagggatgcataacagtatca
acaacacattatggagagattaaaaacttctccgagcaacatccagactttgaaaatgca
gctatggaatttagaaaagacaccttagagccattatataagcttaatataggaaaaaca
ggagatagtaatgctctttatatatcaaagaaaatgggaatttcagataatataattgaa
agagctagaagatatatagaaaataaggattataattatgagctagtaagggatagcaag
gttaataagaaaaaagatattgaagaagataaaggtgaaatatatgagtttgttatagga
gataaggtcctttgggtggataagaacgaaagtgccattgtttacaaagaaaaggatata
tataataatataactattttatttaacaaagaatttgttaatgtaaattacacgagatta
aaattagaaattaaggcctcagagctatatccagagggatatgacttaaatcaattattt
gttaactttaaagaaagaaagcttgaaagggatatagaaagagggtccaaaaaggcttta
aagaaacttaaaaaaaatcatttaaaataa
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