KEGG   Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c16360
Entry
CLPA_c16360       CDS       T03753                                 
Symbol
cshA1
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
cpat  Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLPA_c16360 (cshA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpat03019]
    CLPA_c16360 (cshA1)
   03009 Ribosome biogenesis [BR:cpat03009]
    CLPA_c16360 (cshA1)
Enzymes [BR:cpat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CLPA_c16360 (cshA1)
Messenger RNA biogenesis [BR:cpat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CLPA_c16360 (cshA1)
Ribosome biogenesis [BR:cpat03009]
 Prokaryotic type
  rRNA helicases
   CLPA_c16360 (cshA1)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 DUF5667
Other DBs
NCBI-ProteinID: AJA51699
UniProt: A0A0H3J1F6
LinkDB
Position
complement(1748772..1750340)
AA seq 522 aa
MKNIKFTELELKDTVLKAIDDMGFENPSEIQSASIPVIMEGFDIIGQAQTGTGKTCAFGA
PIISKIDTSKRFIQALILTPTRELAIQIYEELRRLSKYDKVRSLPVYGGQSMDRQISSIK
KDVSIIVGTPGRVLDHIRRKTLKLNNLNYLVLDEADEMLNMGFIDDIEEIIKNTNSERQT
LLFSATMPKPIKKLSENYLKKDVKHIQILKKSLTVSKIDQYYYEVHNNTRLESLCRILDI
SEPESAIIFCRTKKSVDELVSTMSSKGYNIEGMHGDMKQKNRLSTLNKFKNGNLTFLAAT
DVAARGIDVENITHVINYELPQDTESYVHRIGRTGRANRSGTAISLITRKDFTKLKQIEK
DIKSKITKQKIPTMQEIINIKSKNIVSKVSNILSTEEYKKFEPIIENLGKEYSLNQIAAA
LLKNALDKEISTEYNDDLFNQENSVRLFMSIGRRDGINIKSLLEFIDTTSTVNSNYIGSI
DILDKFSFVDVNEKKVSLVIKNTDGKKFNNRRVNIEVAKNKN
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgaaaaacattaaatttactgaacttgaattgaaggatacggttttaaaagccatagat
gatatgggatttgaaaatccttctgaaatacaaagtgcaagtattcctgttataatggaa
ggctttgatattatcggtcaagcacaaacaggtactggaaaaacctgtgctttcggtgct
cctattattagtaaaatagacacctcaaaacgctttattcaagcattaatattaactcct
acaagagaacttgcaattcaaatatatgaagaattaagaagactttctaaatacgacaag
gttcgttcattaccagtctatggaggtcaatctatggatagacaaatatccagtataaaa
aaagatgtttccataatagttggtacccctggaagggttctagatcatataagacgaaaa
acattaaaactgaataatcttaactatttagtactagatgaagcagatgaaatgctcaat
atgggatttattgatgatattgaagaaatcataaaaaatactaatagcgaaagacaaact
ttgctgttttctgcaactatgccaaaaccaataaaaaaactatctgaaaactatctaaaa
aaagatgtgaaacatattcaaatattaaaaaaatctttaacagtatcaaaaatagatcaa
tattattatgaagtccataataatacaagacttgagtctctatgcagaattttagatata
tcagaaccggaaagtgctattatcttttgcagaacaaaaaaaagtgttgatgaattagta
agtaccatgagttccaaaggatacaatatagagggaatgcatggtgatatgaaacaaaag
aatagactttctactttaaataaatttaaaaatggcaatttaacctttcttgccgcaacg
gatgtagctgcaaggggaattgatgtagagaatataacccatgtaattaactatgaactt
ccacaggatactgaatcctatgttcacagaatcggaagaactggaagagctaatagatct
ggtacagcaataagccttataactagaaaagattttacaaaactaaagcagatagaaaaa
gatataaagagcaaaattactaaacaaaagatacctactatgcaggaaataataaacatt
aagtcaaaaaatattgtaagtaaagtttcaaatattcttagtacagaagaatacaaaaaa
ttcgaaccaattatagaaaacttaggtaaagaatattcattaaatcaaattgcagcagct
ctattgaagaatgcacttgataaagaaatatccacagaatacaatgatgatttatttaat
caagaaaattcagtgagattatttatgtctataggtcgtagagatggaataaatataaaa
tcacttttagaatttatagatactacttccactgtcaattcaaattatataggaagtatt
gatatattggataaattttcttttgtagatgtaaatgaaaagaaagtatcattagtaatt
aaaaatactgatggcaaaaaatttaataatagaagagttaatattgaagtagctaaaaat
aaaaattag

DBGET integrated database retrieval system