Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c20110
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Entry
CLPA_c20110 CDS
T03753
Symbol
cshA2
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLPA_c20110 (cshA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpat03019
]
CLPA_c20110 (cshA2)
03009 Ribosome biogenesis [BR:
cpat03009
]
CLPA_c20110 (cshA2)
Enzymes [BR:
cpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLPA_c20110 (cshA2)
Messenger RNA biogenesis [BR:
cpat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLPA_c20110 (cshA2)
Ribosome biogenesis [BR:
cpat03009
]
Prokaryotic type
rRNA helicases
CLPA_c20110 (cshA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AJA52069
UniProt:
A0A0H3J2C8
LinkDB
All DBs
Position
2150864..2151973
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AA seq
369 aa
AA seq
DB search
MKMNFKELGISEDIINTLKKTGITEPTVIQKESIRFIKNGRDIIAEAQTGTGKTLAFLLP
IFENISVNSSAIQALIVTPTRELAIQITEEAMKLKEAKDINILAAYGGKDIGSQMKKLKG
SIHLIIATPGRLLDHLARKTINLMNLKTLVLDEADQILLMGFKNDIENIIKETSKKRQTL
CFSATMNAEVKKLAYRYMKDPLIVTAKKEKITLDNIKQYVVETTDRQKQDALCSVLDEDK
PFMAIIFCRTKRRVDDLEVDLYRRGYDCVKLHSDIIQSKRERIMKSFRNGDIQYLIATDV
AARGLDISGVSHIYNYDIPESAESYIHRIGRTGRAGEYGYTCMFIDPKNKRELEEIEKAI
KFKIQRRYI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaattttaaagaattgggaattagtgaggatataataaatacattaaagaaa
acaggcattactgaaccaacagtgattcaaaaagaaagtattagatttattaaaaatgga
agagacattatagcagaagcacaaacaggtactggaaaaactcttgctttcttactgcct
atttttgagaatatatcagttaattcttcagcaattcaggccttgattgtaacccccaca
agagagcttgcaattcaaataactgaagaagctatgaaacttaaagaagctaaagatatc
aatattttggcagcctatggtggtaaagatataggatctcaaatgaaaaaattaaaggga
agtatccatttaattatagcgaccccaggcagacttttagatcatcttgccagaaaaaca
ataaacctcatgaatttaaagactttagtactagatgaagccgatcaaatactacttatg
ggttttaaaaatgatattgaaaatattataaaggaaacttctaaaaaacgtcaaacatta
tgtttttctgcaactatgaatgctgaagttaaaaaactagcctatagatatatgaaggat
cccttaatagttactgctaaaaaagagaaaattacactggataatattaaacaatatgtg
gtagaaactacagacagacaaaaacaagatgctttatgtagtgttttagatgaagataaa
ccctttatggctataatattttgcagaactaagagaagagttgacgatcttgaagtagac
ttgtatagacgtggatatgattgtgtaaaacttcatagtgatataattcagtcaaaacgt
gaaagaataatgaaatcttttagaaatggagacattcaatacttaatagccacagatgtt
gcagctaggggattagatataagtggagttagtcatatatataattatgatattccagaa
agtgcagagtcttatattcaccgtattggtagaaccggaagagctggtgaatacggctat
acctgcatgtttatagatcctaaaaataaacgagaattagaggaaatagaaaaagctata
aaatttaagatacagagaaggtatatttaa
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