Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c20270
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Entry
CLPA_c20270 CDS
T03753
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpat03009
]
CLPA_c20270 (rimO)
Enzymes [BR:
cpat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLPA_c20270 (rimO)
Ribosome biogenesis [BR:
cpat03009
]
Prokaryotic type
ribosomal protein modification factors
CLPA_c20270 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
23S_rRNA_IVP
Motif
Other DBs
NCBI-ProteinID:
AJA52085
UniProt:
A0A0H3J4Y8
LinkDB
All DBs
Position
complement(2169597..2170937)
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AA seq
446 aa
AA seq
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MNKLNFGLISLGCDKNRIDSETILGNIEHNYEIVNDPKKADIILVNTCGFIEASKQESIN
TILEMAEYKSKYNCKMLIATGCLTQRYGDELLNLMPELDLILGVNDYNGLNDAINNFFSC
GGKKQSLCNYSDKNINEGKRIVTTGSFSAYVRISEGCNNSCSYCIIPKIRGKYRSRTMED
IIDECNELNKQGVKEIILVAQDTTRYGIDIYNKKMLPELLRKISRIKSIEWIRILYCYPE
EITEELIEEISVNDKVCKYIDIPIQHISNNILKNMKRHTKKDKIIKSILNLKGKVENICL
RTSIIVGFPGETEEDFQELKEFIKFIRFDKLGVFKYSREEDTEAFNMPNQIDESVKEQRQ
EELMLMQQQISKEINKSKIGNIYKVIIEGKNDNDYWYGRNYEMSPEIDGEIFFKCDKILN
VGDFTNIKIIDSLEYDLIGVVCDESC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaattaaattttggacttataagtttaggctgtgataagaatagaattgattca
gaaactatattaggaaatattgaacataattatgaaatagtaaatgatcctaaaaaggct
gatattattttagtaaatacttgtggatttattgaagcctcaaaacaagaatctataaat
accatattggaaatggcagaatataaaagcaaatataattgtaaaatgctcatagctaca
ggatgtttaactcaaagatatggggatgagctcttaaatctaatgccagagttagattta
atattaggagtaaatgactataatgggcttaatgatgctattaacaatttttttagttgt
ggtggtaaaaagcagagtttatgtaattacagcgacaaaaatataaatgagggaaaaaga
attgtaactacaggatcttttagcgcttatgttagaatatcagaaggttgtaataattcc
tgttcttattgtataattcctaaaattagaggaaaatatagaagcagaactatggaggat
attatagatgaatgtaatgaacttaacaagcaaggggtaaaggagataatacttgttgca
caagatactacaagatatggaatagatatatataataagaagatgcttcctgaattactt
agaaaaatttcaaggataaaatctattgaatggataagaatattatattgttatccagaa
gaaataacagaagaattaatagaagaaatatctgttaatgataaagtatgtaagtatata
gatataccgatacagcatattagtaataatatactaaaaaatatgaaaagacacactaaa
aaagataaaataattaaaagtatattaaatttaaaaggtaaggtagaaaatatatgtctt
aggacttcaattattgttggatttcctggtgaaactgaagaagattttcaagaattaaaa
gaatttattaagtttattagatttgataaattgggagtttttaaatattctagagaagaa
gatacagaagcttttaatatgcctaatcaaatagatgaatctgtaaaagaacagagacag
gaagaattaatgcttatgcagcagcaaatatcaaaagaaataaataaaagtaaaataggc
aatatatataaggttatcatagagggaaaaaatgataatgattattggtatggaagaaat
tatgaaatgtctccggaaatagatggtgaaatttttttcaaatgtgataaaatattaaat
gtaggtgattttactaatataaaaattatagatagtctagaatatgatttaataggggtt
gtatgcgatgaatcttgctaa
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