Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c20340
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Entry
CLPA_c20340 CDS
T03753
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpat03016
]
CLPA_c20340 (truB)
Enzymes [BR:
cpat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLPA_c20340 (truB)
Transfer RNA biogenesis [BR:
cpat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLPA_c20340 (truB)
Prokaryotic type
CLPA_c20340 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AJA52092
UniProt:
A0A0H3J3R5
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All DBs
Position
complement(2178405..2179274)
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AA seq
289 aa
AA seq
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MDGILNVYKKADMTSFDVVRIVRKLSKIKKVGHTGTLDPLATGVLPICIGKATKLVDYIM
DDFKVYDAALKLGVTSDTYDKEGSIIENNCVNIAEKDIINTVKSFQGTIEQIPPMYSALK
VNGKRLYDLARKGIEIERKSRQITIFDIVITNISIPYVYFRIKCSKGTYIRSLCNDIGLK
LGCGALMWSLERTATGIFTKDNSVNIDRLTEENIKDYLIPMDNSLSKYRELSFDKSLEKL
LVNGVIIKNPLLIDHIPKGELFRTYLKNDKFIGIGTKNEAGFKLVKLLI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacggtattttaaatgtgtacaaaaaagctgatatgacctcttttgatgtagtaaga
attgtacgtaaattgagtaaaattaaaaaggttggtcacacggggacattggatccttta
gctacgggagtactacctatttgtattggaaaagctactaaacttgtagattatattatg
gatgattttaaagtatatgatgctgctttgaagcttggcgttacaagtgatacttatgat
aaagagggttctataattgaaaataattgtgtaaatatagctgaaaaggatataattaat
actgtaaaatcttttcaaggaacaatagaacagattcctcccatgtattcagctttaaaa
gtaaatggaaaaagattgtatgatttagctagaaagggaattgaaatagaaagaaagagc
aggcagataactatatttgatatagttattacaaatatttcaataccttacgtttatttt
aggataaaatgctcaaagggaacttatataagaagcctttgtaatgatataggattaaaa
cttggctgtggcgctctaatgtggtctttagaaagaaccgctacaggcatttttacaaaa
gataattcagttaatatagatcgtttaactgaagaaaatataaaagattatttaattcct
atggataattctctaagtaaatatagagaattatcttttgataaaagtttagaaaaattg
cttgtgaatggagttataattaaaaatcctttattaatagatcatattcctaaaggagaa
ttattcagaacttatttaaaaaatgataaatttattggcataggtacaaaaaatgaagct
ggatttaagctggttaaattattaatttag
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