Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c21060
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Entry
CLPA_c21060 CDS
T03753
Symbol
priA1
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLPA_c21060 (priA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpat03400
]
CLPA_c21060 (priA1)
Enzymes [BR:
cpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLPA_c21060 (priA1)
DNA repair and recombination proteins [BR:
cpat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLPA_c21060 (priA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
T2SSE
AAA_11
Zn_ribbon_6
PIF1
TrwB_AAD_bind
zf-CHY
Zn_ribbon_PF0610
SLFN-g3_helicase
cpSF2-GREB1
DUF1272
Motif
Other DBs
NCBI-ProteinID:
AJA52164
UniProt:
A0A0H3J2M5
LinkDB
All DBs
Position
complement(2245007..2247208)
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AA seq
733 aa
AA seq
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MFKYAGVVINNESSEVDKIFTYKIPKNLMNLIRIGQRVKVPFGRGNKMVFGFIIELYETY
ESTYNIKNIDSICDDFTVLREKDIELINLMRKKYICTYLDCIKLIIPTAINRGMKQKTSN
KIFIKNRLTDKYNREPYSNIFFAVENNNGKYSKSELSKNFKLSLSSINTLIKHDFLSADK
KIIDRYNQKKYKKYCEKKLNENQQFAVNKIINSNKNKFLIHGVTGSGKTEIYMNLVNIMM
KQGKDSIVLVPEIALTPQTVERFKGRFGDKIAVFHSGLSDGERYDEWIRVKTNKVKIAVG
ARSAIFLPFSNLGMIIIDEEHETSYKSEITPKYTAVEVGIIKSNLENCKLVLGSATPSLE
TYYKCTNKEMEIITISKRADGAKFPKISIVDMKEELALNNKSMFSGLLLNEIHRTLSKGD
QIILFLNRRGHSTFVSCRKCGYVFKCEHCDISLTYHSGINKLICHYCGNTKNLTSICPKC
GSKYVKYFGVGTEKIEKEINKIFTGAKTLRMDYDTTRRKNAYEIIYNKFKAGEADILIGT
QMVAKGLDFKNVTLVGVIAADLSLNLPDYRANERTFQLINQVSGRAGRGLKEGRVIIQTY
NSESNAIIAAANNDYLGFYEEEIKIRKSMEYPPFSDIFLINISSKNEDLLIKSTQNISLL
LKNIIKEYSNIKMLGPCPCVISKIKEMFRWQIILKGKINHEFAAYMKKFLYECIKNDYND
IRISVDINPISLL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaaatatgcaggcgttgtgataaataacgaatctagtgaggtagataaaatattt
acctataaaattccaaaaaatttaatgaatttaataagaataggtcagagagtaaaagta
ccttttggtagaggaaataaaatggtatttggatttataattgagctttatgaaacatac
gaaagtacatataatataaagaatatagatagtatttgtgatgattttacagttcttaga
gaaaaagatatagaacttataaatttaatgagaaaaaaatatatatgtacctatttggat
tgtataaaattaattatacctacagctattaatagaggcatgaagcaaaaaacaagtaat
aaaattttcataaaaaacagattaacggataaatataatcgagaaccctatagtaatata
ttttttgcagtagaaaataataatgggaaatatagcaaaagtgaattgagtaaaaatttt
aaattgtcactatcttctataaatacattgataaaacatgattttttaagtgcagataag
aagataattgatagatataatcaaaaaaaatataaaaaatattgcgaaaaaaaattaaat
gaaaatcagcaatttgcagtaaataaaataataaatagtaataaaaataaatttttaata
catggtgtgacaggtagtggtaaaacagaaatatatatgaatcttgtaaacataatgatg
aagcagggaaaagattctattgttttagttccagagattgctctaacaccacaaactgta
gaacggtttaagggaagatttggggataaaatagctgtatttcatagtggactttctgat
ggagaaagatatgatgaatggattagagtaaaaactaataaagtaaagatagctgtagga
gctaggtcggcaatatttttacccttttccaatttagggatgataataatagatgaagaa
catgaaaccagctataaatcagaaataacacctaagtacaccgctgtagaagtaggtata
attaaaagtaatttagaaaattgcaaattagtattgggttctgctacaccttcactagag
acctattataaatgtaccaataaggaaatggaaataataactatttctaaaagagctgat
ggagctaaatttcctaagataagtattgtagatatgaaggaagaactggctttaaataac
aaatctatgtttagtggacttcttttaaatgaaattcataggactttaagcaagggagat
caaattatactttttttaaatagaagaggccattctacttttgtttcctgtagaaaatgc
ggttatgtttttaaatgtgaacattgtgatatatcacttacttatcatagtggaattaat
aaattaatttgccattattgcggcaatactaaaaatttgacttcaatttgtcctaaatgc
ggaagtaagtacgtaaaatactttggagttggaacagaaaaaatagaaaaagaaataaat
aaaatttttactggagccaaaacattgagaatggattatgatactacaaggcgcaaaaat
gcctatgaaataatatataataagtttaaggcaggagaagctgatatacttataggaacc
caaatggtggcaaagggacttgattttaaaaatgttactttagttggagttattgctgca
gatttatctttaaatttgccagattatagggccaatgaaagaacctttcaacttattaat
caagtttcaggaagggcaggtagaggcttaaaagaaggaagagttataatacaaacttat
aatagtgagagtaatgctataatagcagctgccaataatgactatttgggattttatgaa
gaagaaataaaaataagaaaatctatggagtatccaccctttagtgatatatttttaatc
aatataagtagtaaaaatgaagatttattaataaaaagtacacagaatattagtttgtta
ttaaaaaatattataaaagaatatagtaatataaagatgttaggaccatgtccctgtgtt
atatctaaaataaaggaaatgtttagatggcagataatcttaaagggtaaaataaaccat
gagtttgcagcttatatgaaaaaatttctttatgaatgcattaaaaatgattataatgat
ataaggattagtgtagacataaatcctattagtttattgtaa
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