Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c21760
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Entry
CLPA_c21760 CDS
T03753
Name
(GenBank) putative HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpat03019
]
CLPA_c21760
Messenger RNA biogenesis [BR:
cpat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLPA_c21760
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
AcaB
Motif
Other DBs
NCBI-ProteinID:
AJA52234
UniProt:
A0A0H3J2U6
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All DBs
Position
complement(2331112..2332068)
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AA seq
318 aa
AA seq
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MDFKQINELKAGTRIDSFYVIKSVLSRVSSNNKKFLDLIVGDKSGEISAKLWDASAEDEE
LYRENTLVKIRAAVVEWQNNLQLKIDKIRLVTKEDGLDIKNFVPSAPYEADDMYIIMLDY
ISKIKNKDIKNIVNYIIDKAGDKLMNFPAAKKNHHSVRSGLLYHITTMLKAAEALSNVYV
FLNTDLLYSGVILHDMAKLEEMDASELGIVTSYTIEGQLLGHIVMGTEKIAQAAEKVEAD
IEISMILQHMILSHHYEPEYGSPKKPMIPEAEMLHYLDDMDATMFDMKKAVDSVSPGEVS
DPVWSLEKRRIYNSKFDK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttggattttaaacaaataaatgaactaaaagccggtactagaatagatagtttttatgtt
ataaaatctgttttaagtagagtttcatcaaataataaaaagtttcttgatttaattgta
ggagataaaagtggagaaataagtgctaaactgtgggatgcatctgctgaggatgaagaa
ttatatagagaaaatacactggtaaaaataagagcagctgtagtggagtggcaaaacaat
cttcagcttaaaatagataagataagattagtgacaaaagaagatggattagatataaaa
aactttgttccgtcagcaccttatgaagcagatgatatgtatattataatgcttgattat
atatcaaagataaaaaataaggatataaagaatattgtaaattatattatagataaagca
ggggataagcttatgaattttcctgctgctaagaaaaatcatcattctgtaagatctgga
ttattgtatcatataactactatgctcaaggctgcagaagctcttagcaatgtatatgtg
tttttgaatacagatttactctattcaggagtaattcttcatgatatggcaaagctggag
gaaatggatgcttcagaactgggtatagttacttcctatactatagaaggtcagcttttg
ggtcatatagtaatgggaacagaaaaaatagcacaggcagctgaaaaagtagaagcagat
atagaaatttcaatgatacttcagcatatgattttaagtcatcattatgaaccggagtat
ggaagtcctaaaaagcctatgattccagaagcagaaatgcttcattatttagatgatatg
gatgcaactatgtttgatatgaaaaaagctgtagactctgtgagcccaggcgaagtatct
gatcctgtatggtctttagaaaagagaagaatatataattcaaaatttgataagtaa
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